Job Description P16433 Confidence 11.67% Date Thu Jan 5 11:35:09 GMT 2012 Rank 85 Aligned Residues 56 % Identity 25% Template c2dg2D_ PDB info PDB header:protein binding Chain: D: PDB Molecule:apolipoprotein a-i binding protein; PDBTitle: crystal structure of mouse apolipoprotein a-i binding2 protein Resolution 2.45 Å

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		92	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																																	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.																																	.
Query Sequence		M	R	S	P	A	L	R	A	W	Q	S	A	.	.	.	.	.	.	.	.	.	.	.	P	D	P	K	I	C	I	S	Y	G	A	C	G	N	S	G	G	I	F	H	D	L	Y	C	V	W	G	G	T	D	K	I	.	V	P	V	D	V	Y	I	P	G	C	P	P	T	P	A	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.																																	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.											.							.	.	.													.
Template Conservation																																			.							.	.	.
Template Sequence		X	E	L	A	G	L	S	C	A	T	A	I	A	K	A	Y	P	P	T	S	X	S	K	S	P	P	T	V	L	V	I	C	G	.	P	G	N	N	G	G	.	.	.	D	G	L	V	C	A	R	H	L	K	L	F	G	Y	Q	P	T	I	Y	Y	P	K	R	P	N	K	P	L	F
Template Known Secondary structure																	S		G	G	G	S	S	S	S	S									.	S	S					.	.	.												T	T								S	S				S
Template Predicted Secondary structure																																			.							.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions