Return to main results Retrieve Phyre Job Id

Job DescriptionP11667
Confidence2.30%DateThu Jan 5 11:32:50 GMT 2012
Rank33Aligned Residues51
% Identity14%Templatec2kluA_
PDB info PDB header:immune system, membrane proteinChain: A: PDB Molecule:t-cell surface glycoprotein cd4; PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180........
Predicted Secondary structure 






Query SS confidence 


















































Query Sequence  GQLDVEPKRWFALGTISASFLWFFGLALLAAWLAPRLRTAKAQRIINLVVG
Query Conservation                                               
    
Alig confidence 


















































Template Conservation     
   



 

  
 


  
  

   
 


 
 











Template Sequence  PLVPRGSMALIVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERMSQIKRLLS
Template Known Secondary structure 
SS


SSSS

SSS
TTSS
Template Predicted Secondary structure 







Template SS confidence 


















































   365....370.........380.........390.........400.........410.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions