Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABA0
Confidence7.36%DateThu Jan 5 11:15:01 GMT 2012
Rank31Aligned Residues31
% Identity16%Templatec2ww9B_
PDB info PDB header:ribosomeChain: B: PDB Molecule:protein transport protein sss1; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
Resolution8.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30...
Predicted Secondary structure 


...
Query SS confidence 






















. . .








Query Sequence  NLNATILGQAIAFVLFVLFCMKY. . . VWPPLMAAI
Query Conservation      
     
 
 

   
   ...   

   
Alig confidence 















.





...








Template Conservation 

  
  
  


 

.
 


 











Template Sequence  EYTKIVKAVGIGFIAV. GIIGYAIKLIHIPIRYVI
Template Known Secondary structure  .
Template Predicted Secondary structure  .
Template SS confidence 


































   46...50.........60. ........70.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions