 |
Job Description | P0ABA0 | Confidence | 11.48% | Date | Thu Jan 5 11:15:01 GMT 2012 |
Rank | 21 | Aligned Residues | 26 |
% Identity | 15% | Template | c1bctA_ |
PDB info |
PDB header:photoreceptor | Chain: A: PDB Molecule:bacteriorhodopsin; |
PDBTitle: three-dimensional structure of proteolytic fragment 163-2312 of bacterioopsin determined from nuclear magnetic3 resonance data in solution
|
Resolution | UNK |
|
  |   |
1 | . | . | . | . | |
. | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | L | N | A | . |
T | I | L | G | Q | A | I | A | F | V | L | F | V | L | F | C | M | K | Y | V | W |
Query Conservation |   |
  |   |   |   |   | . |
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|
|
|
|
Template Sequence |   |
M | R | P | E | V | A | S | T | F | K | V | L | R | N | V | T | V | V | L | W | S | A | Y | P | V | V | W |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|