Job Description P39180 Confidence 45.21% Date Thu Jan 5 11:58:24 GMT 2012 Rank 38 Aligned Residues 181 % Identity 11% Template d2vdfa1 SCOP info Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Resolution 1.95

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		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.													.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	V	N	G	E	N	N	S	V	R	L	S	I	Q	G	G	H	L	G	H	D	N	N	.	.	.	.	.	.	.	.	.	.	.	.	G	G	I	A	R	G	A	T	P	E	S	S	G	S	Y	G	F	V	R	L	E	G	D	L	M	R	T	E	V	A	G	M	S	V	T	A	G	V	Y	G	A	A	G	H
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	D	I	P	F	D	A	N	Q	G	I	R	L	E	A	G	F	G	R	S	K	K	N	I	I	N	L	E	T	D	E	N	K	L	G	K	T	K	N	V	K	L	P	T	G	V	P	E	N	R	I	D	L	Y	T	G	Y	T	Y	T	Q	T	L	S	D	S	L	N	F	R	V	G	A	G	L	G	F	E	S
Template Known Secondary structure							S	S	S	S																										T	S	S									S																				T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	V	D	V	K	D	D	D	G	S	R	A	G	T	V	R	D	D	A	G	S	L	G	G	Y	L	N	L	V	H	T	S	S	G	L	W	A	D	I	V	A	Q	G	T	R	H	S	M	K	A	S	S	D	N	N	D	F	R	A	R	G	W	G	W	L	G	S	L	E	T	G	L	P	F	S	I	T	D	N
Query Conservation
Alig confidence							.	.	.	.	.																				.	.
Template Conservation							.	.	.	.	.																				.	.
Template Sequence		S	K	D	S	I	.	.	.	.	.	L	H	S	S	R	Q	S	W	L	A	K	V	H	A	D	L	L	S	Q	.	.	L	G	N	G	W	Y	I	N	P	W	S	E	V	K	F	D	L	N	S	R	Y	K	L	N	T	D	I	N	Q	K	T	N	G	W	G	F	G	L	G	A	N	I	G	K	K	L	G	A	S
Template Known Secondary structure							.	.	.	.	.																				.	.			T	T
Template Predicted Secondary structure							.	.	.	.	.																				.	.
Template SS confidence
		119	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		883	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	E	P	Q	L	Q	Y	T	W	Q	G	L	S	L	D	D	G	K	D	N	A	G	Y	V	K	F	G	H	G	S	A	Q	H	V	R	A	G	F	R	L	G	S	H	N
Query Conservation
Alig confidence																		.						.	.	.	.	.
Template Conservation																		.						.	.	.	.	.
Template Sequence		I	E	A	G	P	F	Y	K	Q	R	T	Y	K	E	S	G	.	E	F	S	V	S	.	.	.	.	.	L	T	I	P	K	T	S	I	R	E	Y	G	L	R	V	G	I	K	F
Template Known Secondary structure																		.		B				.	.	.	.	.	B
Template Predicted Secondary structure																		.						.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions