Job Description P39180 Confidence 95.82% Date Thu Jan 5 11:58:24 GMT 2012 Rank 25 Aligned Residues 142 % Identity 14% Template c2lhfA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles Resolution UNK

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		888	.	890	.	.	.	.										.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.									.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.																							.
Query SS confidence									.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.																							.
Query Sequence		Q	L	Q	Y	T	W	Q	.	.	.	.	.	.	.	.	.	G	L	S	L	D	D	G	K	D	N	A	G	Y	V	K	F	G	H	G	S	A	Q	H	V	R	A	G	F	R	L	G	S	H	.	.	.	.	.	.	.	.	N	D	M	T	F	G	E	G	T	S	S	R	A	P	L	R	D	S	A	K	H	S	.
Query Conservation									.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.																							.
Alig confidence									.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		F	V	G	L	T	W	G	E	T	S	N	N	I	Q	K	S	K	S	L	N	R	N	L	N	S	P	N	L	D	K	V	I	D	N	T	G	T	W	G	I	R	A	G	Q	Q	F	E	Q	G	R	Y	Y	A	T	Y	E	N	I	S	D	T	S	S	G	N	K	L	R	Q	Q	N	L	L	G	S	Y	D	A	F	L
Template Known Secondary structure																			S		S	S									S				S	S												T	T														S	S			S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.
Predicted Secondary structure		.																																																																													.	.	.
Query SS confidence		.																																																																													.	.	.
Query Sequence		.	V	S	E	L	P	V	N	W	W	V	Q	P	S	V	I	R	T	F	S	S	R	G	D	M	R	V	G	T	S	T	A	G	S	G	M	T	F	S	P	S	Q	N	G	T	S	L	D	L	Q	A	G	L	E	A	R	V	R	E	N	I	T	L	G	V	Q	A	G	Y	A	H	S	V	S	G	S	S	.	.	.
Query Conservation		.																																																																													.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.																																																					.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	G	D	N	N	T	K	L	F	G	G	A	T	L	.	.	.	.	.	.	.	.	.	.	G	L	V	K	L	E	Q	D	G	K	G	F	K	R	D	S	D	V	G	Y	A	A	G	L	Q	A	G	I	L	Q	E	L	S	K	N	A	S	I	E	G	G	Y	R	Y	L	R	T	N	A	S	T	E	M	T	P
Template Known Secondary structure		B		S	S	S	S		B								.	.	.	.	.	.	.	.	.	.								S		S	S	S																					S	S	S																S		S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
													1026	.	.	.	1030	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	E	G	Y	N	G	Q	A	T	L	N	V	T	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	G	N	K	L	G	S	L	D	L	H	S	S	S	Q	F	Y	L	G	A	N	Y	K	F
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions