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Job DescriptionP39180
Confidence13.16%DateThu Jan 5 11:58:24 GMT 2012
Rank51Aligned Residues134
% Identity18%Templatec1fw3A_
PDB info PDB header:hydrolase, membrane proteinChain: A: PDB Molecule:outer membrane phospholipase a; PDBTitle: outer membrane phospholipase a from escherichia coli
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   837..840.........850.........860.........870.........880.........890.........900.........910......
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Query Sequence  GLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQ
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Template Sequence  GWTLRDVEMGYNHD. NGRSDPTSRSWNRLYTRLMAENG. . . . . . . NWLVEVK. . . PWYVVGNT. . . DDNP. . . . . . . . . .
Template Known Secondary structure  T
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   130.........140... ......150.........160...... ...170... ......180. ....
 
   917..920.........930.........940.........950.........960.........970.........980.........990......
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Query Sequence  HVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD
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Template Sequence  . . . . . . . . . . DITKYMG. . . . . . . . . . . . . . . . . . . . . . . . YYQLKIGYHL. GDAVLSA. . . . . . . . . KGQYNWNTGYGG
Template Known Secondary structure  ..........T
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   187..190... ......200... ......210 .........220..
 
   997..1000.........1010...... ...1020.........1030........
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Query Sequence  LQAGLEARVRENITLGVQAG. . YAHSVSGSSAEGYNGQATLNVT
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Template Sequence  AELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLN
Template Known Secondary structure  SSSS
S
SSSTTTT

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   223......230.........240.........250.........260......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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