Job Description Q46858 Confidence 97.31% Date Thu Jan 5 12:35:18 GMT 2012 Rank 2 Aligned Residues 95 % Identity 15% Template c3k7cC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:putative ntf2-like transpeptidase; PDBTitle: crystal structure of putative ntf2-like transpeptidase (np_281412.1)2 from campylobacter jejuni at 2.00 a resolution Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure													.										.	.	.	.	.	.	.																						.	.
Query SS confidence													.										.	.	.	.	.	.	.																						.	.
Query Sequence		Q	T	V	E	Q	T	V	R	H	I	Y	.	Q	N	Y	K	S	D	A	T	A	.	.	.	.	.	.	.	P	Y	F	G	E	T	G	E	R	A	I	T	S	A	R	I	Q	Q	A	L	T	.	.	L	N	D	N	L	T	L	P	G	N	I	G	W	L	D	Y	D	P	V	C	D	C	Q	D	F	G	D	L	V
Query Conservation													.										.	.	.	.	.	.	.																						.	.
Alig confidence													.										.	.	.	.	.	.	.																						.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	P	E	D	L	A	K	N	F	T	K	D	L	Y	S	G	D	T	K	S	V	X	S	Y	I	D	L	S	E	A	K	S	D	E	E	K	T	F	V	S	D	K	I	T	Q	V	V	A	E	N	A	A	K	A	K	R	X	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	T							T	T	B			T	T			S																									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	S	V	A	I	T	Q	T	D	A	D	H	A	D	A	V	V	R	F	R	I	F	K	D	D	K	E	K	T	T	Q	T	L	K	M	V	A	E	N	G	R	W	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	D	I	Q	I	E	E	K	T	I	N	K	D	S	A	K	I	R	V	L	V	L	F	N	N	D	N	N	Q	S	S	N	V	F	L	A	K	K	D	R	K	W	L	V
Template Known Secondary structure														S	S											T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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