Job Description P0A7E1 Confidence 94.77% Date Thu Jan 5 11:05:27 GMT 2012 Rank 235 Aligned Residues 211 % Identity 19% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																		.	.										.	.	.	.	.
Query SS confidence																		.	.										.	.	.	.	.
Query Sequence		V	R	Q	K	V	P	A	K	P	V	N	C	M	G	L	T	.	.	F	K	N	P	L	G	L	A	A	.	.	.	.	.	G	L	D	K	D	G	E	C	I	D	A	L	G	A	M	G	F	G	S	I	E	I	G	T	V	T	P	R	P	Q	P	G	N	D	K	P	R	L	F	R	L	V	D	A	E	G	L	I
Query Conservation																		.	.										.	.	.	.	.
Alig confidence																		.	.										.	.	.	.	.																									.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	E	E	R	R	E	T	V	V	E	V	E	G	V	R	I	G	G	G	S	K	A	V	I	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	.	.	F	K	P	R	T	S	P	Y	S	F	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		S							T	T				B	T	T	B								S	B																		T		S					B	S	.	.	S				S	S	T	T	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	M	G	F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	M	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N	T	P	G	L	R	T	L	Q	Y	G	E	A	L
Query Conservation
Alig confidence		.	.	.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Conservation		.	.	.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	L	G	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	.	.	P	V	V	T	E	V	L	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	V	E	T	V	S	R	Y	A	D	M	L	Q	I	.	.	.	.	.	.	.	.	G	A	R	N	M	Q	N	F	P	L	L
Template Known Secondary structure		.	.	.			T															T		.	.									G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G									S					.	.	.	.	.	.	.	.		G	G	G	T	T
Template Predicted Secondary structure		.	.	.																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.
Template SS confidence
					85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.														.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	M	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	M	K	N	C	D	Q	T	G	G	L	S	G	R	P
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Sequence		R	E	V	G	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	P	V	L	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R	F	T	L	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T																T	T											B			S			S	S	S	S	B			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.															.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.							.	.
Query SS confidence																										.	.	.	.							.	.
Query Sequence		L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	L	P	I	I	G	.	.	.	.	V	G	G	I	D	S	.	.	V	I	A	A	R	E	K	I	A	A	G	A	S	L	V	Q	I
Query Conservation																										.	.	.	.							.	.
Alig confidence		.	.	.	.	.												.	.							.	.	.	.							.	.
Template Conservation		.	.	.	.	.												.	.
Template Sequence		.	.	.	.	.	V	A	A	V	A	V	L	K	E	A	T	.	.	H	L	P	V	I	V	D	P	S	H	P	A	G	R	R	S	L	V	P	A	L	A	K	A	G	L	A	A	G	A	D	G	L	I	V
Template Known Secondary structure		.	.	.	.	.											B	.	.	S	S												S	G	G	G											T	T		S
Template Predicted Secondary structure		.	.	.	.	.												.	.
Template SS confidence
							196	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions