235 c1vs1B_ Probab=94.77   E-value=0.26  Score=26.21  Aligned_columns=211  Identities=19%

Q ss_pred             CCCCCCCCEEEECCEE--CCCCEEECC-----CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf             7888986458976575--189548678-----998878999999967997899512683312458998299981678538
Q batch____        38 VRQKVPAKPVNCMGLT--FKNPLGLAA-----GLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLI  110 (336)
Q Consensus        38 ~~~~~~~L~t~~~G~~--~~~Pigiaa-----g~~~~~~~~~~~~~~G~g~v~~~tvt~~~~~g~~~pr~~~l~~~~~~~  110 (336)
                      +.....+.-+++.|.+  -..|+.|+.     .++.-.+.++.+.+.|.-++-.++  .+|+......+           
T Consensus         9 ~~~~~~~tii~i~~~~iG~~~~~~IaGpcsi~s~~~a~e~a~~l~~~g~~~~r~~~--~KpRT~~~~f~-----------   75 (267)
T c1vs1B_           9 KSEERRETVVEVEGVRIGGGSKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGGA--FKPRTSPYSFQ-----------   75 (267)
T ss_dssp             CCSSCSCCCEEETTEEEBTTBCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBS--SCCCSSTTSCC-----------
T ss_pred             HHCCCCCCEEEECCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEE--ECCCCCCCCCC-----------
T ss_conf             41011277288789986699379999437789989999999999864574799476--35778863435-----------


Q ss_pred             EEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             85168866699999999964898069996078888967888999999887644123340110117456655444676789
Q batch____       111 NRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEAL  190 (336)
Q Consensus       111 ~s~gl~~~g~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~~~ad~i~lN~~cp~~~~~~~~~~~~~l  190 (336)
                         |+..+|.+.+.+..++.|.  ++++.+.-.             ..++.+....|++-+        +.+...+...+
T Consensus        76 ---g~g~egl~~l~~~~~~~Gl--~~~tev~d~-------------~~~~~~~~~vd~~~I--------gar~~~n~~ll  129 (267)
T c1vs1B_          76 ---GLGLEGLKLLRRAGDEAGL--PVVTEVLDP-------------RHVETVSRYADMLQI--------GARNMQNFPLL  129 (267)
T ss_dssp             ---CCTHHHHHHHHHHHHHHTC--CEEEECCCG-------------GGHHHHHHHCSEEEE--------CGGGTTCHHHH
T ss_pred             ---CCCHHHHHHHHHHHHHCCC--EEEEECCCH-------------HHHHHHHHHHHHHCC--------CCCCCCCHHHH
T ss_conf             ---5416899999999997099--068611698-------------778999985304300--------51011798999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             99999999999876540478982899943899977799999999967997999934855643223334556666415500
Q batch____       191 DDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRP  270 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~Pv~vKl~~~~~~~~~~~~a~~~~~~Gvdgi~v~n~~~~~~~~~~~~~~~~~gg~sG~~  270 (336)
                      ...-..              ..||++|-....+-.+....+..+...|..-+.+.-++............+         
T Consensus       130 ~~~a~~--------------gkPV~lk~G~~~~~~e~~~Ave~i~~~Gn~~i~l~~RG~~s~y~~~~~~~~---------  186 (267)
T c1vs1B_         130 REVGRS--------------GKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLD---------  186 (267)
T ss_dssp             HHHHHH--------------CCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCC---------
T ss_pred             HHHHCC--------------CCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCC---------
T ss_conf             998536--------------980898278889999999999999947997299998056899988876617---------


Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEE----ECCCCC--HHHHHHHHHCCCCEEEE
Q ss_conf             146899999999985189965999----898899--99999999739989998
Q batch____       271 LQLKSTEIIRRLSLELNGRLPIIG----VGGIDS--VIAAREKIAAGASLVQI  317 (336)
Q Consensus       271 ~~~~al~~i~~i~~~~~~~ipIi~----~GGI~~--g~Dv~k~l~~GAd~V~i  317 (336)
                           +..+..+++..  .+||++    .+|.+.  ..-+..++++||++++|
T Consensus       187 -----l~~i~~l~~~~--~~pVi~d~sH~~G~~~~~~~i~~aAva~Ga~G~~I  232 (267)
T c1vs1B_         187 -----VAAVAVLKEAT--HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIV  232 (267)
T ss_dssp             -----HHHHHHHHHHB--SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEE
T ss_pred             -----HHHHHHHHHHC--CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf             -----99999999745--99799976877785014688999999846985999