Job Description P0AA80 Confidence 1.64% Date Thu Jan 5 11:12:09 GMT 2012 Rank 54 Aligned Residues 201 % Identity 11% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	P	K	L	H	Y	I	K	Q	L	L	S	N	R	M	M	L	G	V	F	F	G	Q	Y	F	I	N	T	I	T	W	F	F	L	T	W	F	P	I	Y	L	V	Q	E	K	G	M	S	I	L	K	V	G	L	V	A	S	I	P	A	L	C	G	F	A	G	G	V	L	G	G	V	F	S	D	Y	L	I
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	.	.	.	.	.	.	.	.	.	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S	.	.	.	.	.	.	.	.	.																													T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	G	L	S	L	T	L	A	R	K	L	P	I	V	L	G	M	L	L	A	S	T	I	I	L	C	N	Y	T	N	N	T	T	L	V	V	M	L	M	A	L	A	F	F	G	K	G	F	G	A	L	G	W	P	V	I	S	D	T	A	P	K	E	I	V	G	L	C	G	G	V	F	N	V	F	G	N	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G
Template Known Secondary structure		S	T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		395	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		S	I	V	T	P	L	V	I	G	.	.	.	Y	L	V	S	E	L	H	S	F	N	A	A	L	V	F	V	G	C	S	A	L	M	A	M	V	C	Y	L	F	V	V	G	D	I	K	R	M	E	L	Q	K
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D
Template Known Secondary structure																																													T	S	T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions