Job Description P0AA80 Confidence 2.17% Date Thu Jan 5 11:12:09 GMT 2012 Rank 34 Aligned Residues 71 % Identity 18% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	V	D	E	K	K	K	G	V	H	T	R	Y	L	I	L	L	I	I	F	I	V	T	A	V	N	Y	A	D	R	A	T	L	S	I	A	G	T	E	V	A	K	E	L	Q	L	S	A	V	S	M	G	Y	I	F	S	A	F	G	W	A	Y	L	L	M	Q	I	P	G	G	W	L	L	D	K	F	G
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		D	T	P	K	D	R	A	L	F	N	G	A	Q	K	L	F	G	M	I	I	T	I	G	Q	S	I	V	Y	V	M	T	G	M	Y	G	D	.	.	.	.	.	.	.	P	S	E	M	G	A	G	I	C	L	L	I	T	I	Q	L	F	V	A	G	L	I	V	L	L	L	D	E	L	L	Q	K	G	Y	G
Template Known Secondary structure		S	S	S	S		S	S																									T	S	S			.	.	.	.	.	.	.	S	S		S																												T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions