 |
Job Description | P0A6D3 | Confidence | 5.59% | Date | Thu Jan 5 11:02:52 GMT 2012 |
Rank | 62 | Aligned Residues | 36 |
% Identity | 11% | Template | c3s8iA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:protein ddi1 homolog 1; |
PDBTitle: the retroviral-like protease (rvp) domain of human ddi1
|
Resolution | 1.70 Å |
|
  |   |
277 | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | V | L | E | K | M | G | A | T | I | C | W | G | D | D | Y | I | S | C | T | R | G | E | L | N | A | I | D | M | D | M | N | H | I | P |
Query Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | D | M | L | R | R | H | Q | C | S | I | D | L | K | K | N | V | L | V | I | G | T | T | G | T | Q | T | Y | F | L | P | E | G | E | L | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|  |  |  | T | T | T | T |  |  |  |
| T | T | T |
|
|  |  |  |
|
|
| G | G | G |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|