Job Description P0A6D3 Confidence 100.00% Date Thu Jan 5 11:02:52 GMT 2012 Rank 5 Aligned Residues 408 % Identity 33% Template c3roiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-phosphoshikimate 1-carboxyvinyltransferase; PDBTitle: 2.20 angstrom resolution structure of 3-phosphoshikimate 1-2 carboxyvinyltransferase (aroa) from coxiella burnetii Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	S	L	T	L	Q	P	I	A	R	V	D	G	T	I	N	L	P	G	S	K	S	V	S	N	R	A	L	L	L	A	A	L	A	H	G	K	T	V	L	T	N	L	L	D	S	D	D	V	R	H	M	L	N	A	L	T	A	L	G	V	S	Y	T	L	S	A	D	R	T	R	C	E	I	I	G	N	G	G
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		M	D	.	Y	Q	T	I	P	S	Q	G	L	S	G	E	I	C	V	P	G	D	K	S	I	S	H	R	A	V	L	L	A	A	I	A	E	G	Q	T	Q	V	D	G	F	L	M	G	A	D	N	L	A	M	V	S	A	L	Q	Q	M	G	A	S	I	Q	V	I	E	D	E	N	I	L	V	V	E	G	V	G	M
Template Known Secondary structure				.							S																									S	B	S						S				S													T	T							G	G	G	T									T
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		P	L	H	A	E	G	A	L	E	L	F	L	G	N	A	G	T	A	M	R	P	L	A	A	A	L	C	L	G	S	N	D	I	V	L	T	G	E	P	R	M	K	E	R	P	I	G	H	L	V	D	A	L	R	L	G	G	A	K	I	T	Y	L	E	Q	E	N	Y	P	P	L	R	L	Q	G	G	F	T	.	G
Query Conservation																																																																																.
Alig confidence																																																																.	.															.
Template Conservation																																																																.	.
Template Sequence		T	G	L	Q	A	P	P	E	A	L	D	C	G	N	S	G	T	A	I	R	L	L	S	G	L	L	A	G	Q	P	F	N	T	V	L	T	G	D	S	S	L	Q	R	R	P	M	K	R	I	I	D	P	L	T	L	M	G	A	K	I	D	S	.	.	T	G	N	V	P	P	L	K	I	Y	G	N	P	R	L	T
Template Known Secondary structure		T						S	S					T	T														T	S	S	S								T	T	G	G	G	S												T	T						.	.	S	T	T	S	S								T	T		B
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	D	V	D	G	S	V	S	S	Q	F	L	T	A	L	L	M	T	A	P	L	A	P	E	D	T	V	I	R	I	K	G	D	L	V	S	K	P	Y	I	D	I	T	L	N	L	M	K	T	F	G	V	E	I	E	N	Q	H	Y	Q	Q	F	V	V	K	G	G	Q	S	Y	Q	S	P	G	T	Y	L	V
Query Conservation
Alig confidence																																	.	.	.	.	.																					.	.	.	.	.													.
Template Conservation																																	.	.	.	.	.																					.	.	.	.	.													.
Template Sequence		G	I	H	Y	Q	L	P	M	A	S	A	Q	V	K	S	C	L	L	L	A	G	L	Y	A	R	G	K	T	C	I	T	.	.	.	.	.	E	P	A	P	S	R	D	H	T	E	R	L	L	K	H	F	H	Y	T	L	.	.	.	.	.	Q	S	I	C	V	S	G	G	G	K	L	K	.	A	N	D	I	S	I
Template Known Secondary structure								S	S														T	T	S	B	S						.	.	.	.	.		S	S													T	T			B	.	.	.	.	.							T	T				B	.
Template Predicted Secondary structure																																	.	.	.	.	.																					.	.	.	.	.													.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.									.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																					.																																				.	.	.	.	.	.	.	.
Query SS confidence																					.																																				.	.	.	.	.	.	.	.
Query Sequence		E	G	D	A	S	S	A	S	Y	F	L	A	A	A	A	I	K	G	G	.	T	V	K	V	T	G	I	G	R	N	S	M	Q	G	D	I	R	F	A	D	V	L	E	K	M	G	A	T	I	C	W	G	D	D	Y	.	.	.	.	.	.	.	.	I	S	C	T	R	G	E	L	N	A	I	D	M	D	M	N	H
Query Conservation																					.																																				.	.	.	.	.	.	.	.
Alig confidence																					.														.	.																					.	.	.	.	.	.	.	.
Template Conservation																																			.	.
Template Sequence		P	G	D	I	S	S	A	A	F	F	I	V	A	A	T	I	T	P	G	S	A	I	R	L	C	R	V	G	V	N	P	T	R	.	.	L	G	V	I	N	L	L	K	M	M	G	A	D	I	E	V	T	H	Y	T	E	K	N	E	P	T	A	D	I	T	V	R	H	A	R	L	K	G	I	D	I	P	P	D	Q
Template Known Secondary structure			B															S	T	T												T	T	S	.	.										T	T																										B						G	G	G
Template Predicted Secondary structure																																			.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		311	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		I	P	.	.	.	D	A	A	M	T	I	A	T	A	A	L	F	A	K	G	T	T	T	L	R	N	I	Y	N	W	R	V	K	E	T	D	R	L	F	A	M	A	T	E	L	R	K	V	G	A	E	V	E	E	G	H	D	Y	I	R	I	T	P	P	E	K	L	N	F	A	E	I	A	T	Y	N	D	H	R	M
Query Conservation				.	.	.
Alig confidence				.	.	.																																																													.
Template Conservation																																																																			.
Template Sequence		V	P	L	T	I	D	E	F	P	V	L	L	I	A	A	A	V	A	Q	G	K	T	V	L	R	D	A	A	E	L	R	V	K	E	T	D	R	I	A	A	M	V	D	G	L	Q	K	L	G	I	A	A	E	S	L	P	D	G	V	I	I	Q	G	G	T	.	L	E	G	G	E	V	N	S	Y	D	D	H	R	I
Template Known Secondary structure										T	T								S	B	S							S	S																				T	T							T	T									.									T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		A	M	C	F	S	L	V	A	L	S	D	T	P	.	V	T	I	L	D	P	K	C	T	A	K	T	F	P	D	Y	F	E	Q	L	A	R	I	S	Q
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		A	M	A	F	A	V	A	G	T	L	A	K	G	P	V	R	I	R	N	C	D	N	V	K	T	S	F	P	N	F	V	E	L	A	N	E	V	G	M
Template Known Secondary structure													S	S															T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.