Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6D3
Confidence7.22%DateThu Jan 5 11:02:52 GMT 2012
Rank55Aligned Residues76
% Identity17%Templatec3kzpA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative diguanylate cyclase/phosphodiesterase; PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from listaria monocytigenes
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290. ........300.........310.........320.........330.......
Predicted Secondary structure 



................


















Query SS confidence 

















. . . . . . . . . . . . . . . .













































Query Sequence  IRFADVLEKMGATICWGD. . . . . . . . . . . . . . . . DYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNW
Query Conservation     
  
  

  
    ................  
 
    
    
     

  
 

 


 
 
 
 
     
Alig confidence 

















................












































.
Template Conservation     
  
   
  



  
        
  
    



   
                
   
      


 


 .
Template Sequence  LNKIKVIHGLGYHIAIDDVSCGLNSLERVXSYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIET.
Template Known Secondary structure  TT

STTSTT

GGG
SGGGGTTS
TT

S.
Template Predicted Secondary structure 

























.
Template SS confidence 















































































   131........140.........150.........160.........170.........180.........190.........200.........
 
   338.340.........350........
Predicted Secondary structure 








Query SS confidence 




















Query Sequence  RVKETDRLFAMATELRKVGAE
Query Conservation 
 





 
    
  

  
Alig confidence  ........












Template Conservation  ........      
   

 
Template Sequence  . . . . . . . . KETXTLLESHGVS
Template Known Secondary structure  ........TTT

Template Predicted Secondary structure  ........



Template SS confidence 




















   210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions