Job Description P0A6D3 Confidence 100.00% Date Thu Jan 5 11:02:52 GMT 2012 Rank 10 Aligned Residues 401 % Identity 18% Template c2yvwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine 1-carboxyvinyltransferase; PDBTitle: crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase2 from aquifex aeolicus vf5 Resolution 1.81 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	T	L	Q	P	I	A	R	V	D	G	T	I	N	L	P	G	S	K	S	V	S	N	R	A	L	L	L	A	A	L	A	H	G	K	T	V	L	T	N	L	L	D	S	D	D	V	R	H	M	L	N	A	L	T	A	L	G	V	S	Y	T	L	S	A	D	R	T	R	C	E	I	I	G	N	G	G	P
Query Conservation
Alig confidence																																																																											.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		D	Y	F	V	I	R	G	G	K	P	L	T	G	K	V	K	I	S	G	A	K	N	A	A	L	P	I	M	F	A	T	I	L	T	E	E	P	C	T	I	T	N	V	P	D	L	L	D	V	R	N	T	L	L	L	L	R	E	L	G	A	E	L	E	F	L	N	N	T	V	F	I	N	.	.	.	.	P	S	I
Template Known Secondary structure																				B												G	G	G		S	S						S				S													T	T							T	T						.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	A	E	G	A	L	E	L	F	L	G	N	A	G	T	A	M	R	P	L	A	A	A	L	C	L	G	S	N	D	I	V	L	T	G	E	P	R	M	K	E	R	P	I	G	H	L	V	D	A	L	R	L	G	G	A	K	I	T	Y	L	E	Q	E	N	Y	P	P	L	R	L	Q	G	G	F	T	G	G	N
Query Conservation
Alig confidence																																																															.	.												.
Template Conservation																																																															.	.												.
Template Sequence		N	S	F	I	T	N	Q	E	I	I	R	R	M	R	A	S	V	L	S	L	G	P	L	L	G	R	F	G	R	A	V	V	G	L	P	G	G	C	S	I	G	A	R	P	I	D	Q	H	L	K	F	F	K	E	A	G	A	D	V	E	V	.	.	R	E	G	Y	V	Y	V	N	L	K	E	.	K	R	R	V	H
Template Known Secondary structure															G	G	G	G	G	G									S										B	T	T	B														T	T						.	.		T	T							S	S	.
Template Predicted Secondary structure																																																															.	.												.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	D	G	S	V	S	S	Q	F	L	T	A	L	L	M	T	A	P	L	A	P	E	D	T	V	I	R	I	K	G	D	L	V	S	K	P	Y	I	D	I	T	L	N	L	M	K	T	F	G	V	E	I	E	N	Q	H	Y	Q	Q	F	V	V	K	G	G	Q	S	Y	Q	S	P	G	T	Y	L	V	E	G
Query Conservation
Alig confidence								.																							.	.	.																														.										.
Template Conservation								.																							.	.	.																														.										.
Template Sequence		F	K	F	D	L	V	.	T	V	T	G	T	E	N	A	L	L	Y	L	A	S	V	P	E	E	S	I	L	E	.	.	.	N	I	A	L	E	P	E	V	M	D	L	I	E	V	L	K	K	M	G	A	H	V	K	V	E	G	R	S	A	.	Y	V	K	G	S	E	N	L	K	.	G	F	T	H	S	V	I	P
Template Known Secondary structure					S	S		.													T	T		S	S						.	.	.	S																	T	T							T	T			.						S	S			.								B
Template Predicted Secondary structure								.																							.	.	.																														.										.
Template SS confidence
		164	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.
Predicted Secondary structure																																																											.															.	.	.	.
Query SS confidence																																																											.															.	.	.	.
Query Sequence		D	A	S	S	A	S	Y	F	L	A	A	A	A	I	K	G	G	T	V	K	V	T	G	I	G	R	N	S	M	Q	G	D	I	R	F	A	D	V	L	E	K	M	G	A	T	I	C	W	G	D	D	Y	I	S	C	T	R	.	G	E	L	N	A	I	D	M	D	M	N	H	I	P	.	.	.	.	D	A	A	M
Query Conservation																																																											.															.	.	.	.
Alig confidence																																	.	.	.																								.															.	.	.	.
Template Conservation																																	.	.	.
Template Sequence		D	R	I	E	A	G	T	F	M	V	G	A	V	L	T	D	G	E	I	L	L	E	N	A	R	I	N	H	L	R	A	.	.	.	V	V	E	K	L	K	L	I	G	G	E	V	V	E	E	N	G	N	L	R	V	F	R	K	E	S	L	R	A	C	D	I	E	T	Q	V	Y	P	G	F	P	T	D	M	Q	A
Template Known Secondary structure																T	T							S			G	G	G				.	.	.									T							T	T								S			B						B		S	T	T	S	B
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	T	A	A	L	F	A	K	G	T	T	T	L	R	N	I	Y	N	W	R	V	K	E	T	D	R	L	F	A	M	A	T	E	L	R	K	V	G	A	E	V	E	E	G	H	D	Y	I	R	I	T	P	P	E	K	L	N	F	A	E	I	A	T	Y	N	D	H	R	M	A	M	C	F	S	L	V	A	L
Query Conservation
Alig confidence																			.	.	.	.	.	.																																											.
Template Conservation																			.	.	.	.	.	.																																											.
Template Sequence		Q	F	M	A	L	L	S	V	A	K	G	K	S	R	I	K	E	.	.	.	.	.	.	N	I	F	E	H	R	F	H	H	A	Q	E	L	N	R	L	G	A	N	I	T	V	R	G	N	T	A	Y	V	E	G	V	E	R	L	Y	G	S	E	V	Y	S	.	T	D	L	R	A	S	A	S	L	V	L	A	G	L
Template Known Secondary structure								T	T	S	B	S							.	.	.	.	.	.	S	S		T	T										T	T	T							T	T								S			B							.			T	T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.																																											.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.
		397	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		S	D	T	P	.	V	T	I	L	D	P	K	C	T	A	K	T	F	P	D	Y	F	E	Q	L	A	R	I	S	Q
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		V	A	Q	G	E	T	V	V	R	D	V	Y	H	L	D	R	G	Y	E	K	L	E	E	K	L	K	K	L	G	A
Template Known Secondary structure			S	B	S							T								S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.