Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE0
Confidence99.97%DateThu Jan 5 11:28:52 GMT 2012
Rank2Aligned Residues112
% Identity100%Templated1eyga_
SCOP infoOB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIE
Query Conservation      

 
 
 
 
  

       
       

      
              
      
      
 

  
 
 
Alig confidence 















































































Template Conservation      

 
 
 
 
  

    
  
     
 

                     
      
      
 

  
 
 
Template Sequence  ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIE
Template Known Secondary structure 

SS


SS



SSS





TTT

S





TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   1001........1010.........1020.........1030.........1040.........1050.........1060.........1070.........1080
 
   82.......90.........100.........110...
Predicted Secondary structure 






Query SS confidence 































Query Sequence  GQLRTRKWTDQSGQDRYTTEVVVNVGGTMQML
Query Conservation 
 
      
  
       
 
  
      
Alig confidence 































Template Conservation 
 
        

      



  
  
  
Template Sequence  GQLRTRKWTDQSGQDRYTTEVVVNVGGTMQML
Template Known Secondary structure 
TTS

TT

Template Predicted Secondary structure 







Template SS confidence 































   1081........1090.........1100.........1110..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions