Job Description P0AGE0 Confidence 24.96% Date Thu Jan 5 11:28:52 GMT 2012 Rank 78 Aligned Residues 88 % Identity 10% Template c1jb7A_ PDB info PDB header:dna-binding protein/dna Chain: A: PDB Molecule:telomere-binding protein alpha subunit; PDBTitle: dna g-quartets in a 1.86 a resolution structure of an oxytricha nova2 telomeric protein-dna complex Resolution 1.86 Å

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		3	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		S	R	G	V	N	.	.	K	V	I	L	V	G	N	L	G	Q	D	P	E	V	R	Y	M	P	N	G	G	A	V	A	N	I	T	L	A	T	S	E	S	W	R	D	K	A	T	G	E	M	K	E	Q	T	E	W	H	R	V	V	L	F	G	K	L	A	E	V	A	S	E	Y	L	R	K	G	S	Q	V	Y	I
Query Conservation							.	.
Alig confidence							.	.																													.
Template Conservation																																					.
Template Sequence		A	S	L	T	S	A	Q	P	Q	H	F	Y	A	V	V	I	D	A	T	F	P	Y	K	T	N	Q	E	R	Y	I	C	S	L	K	I	.	V	D	P	T	L	Y	L	K	Q	Q	K	G	A	G	D	A	S	D	Y	A	T	L	V	L	Y	A	K	R	F	E	D	L	P	I	I	H	R	A	G	D	I	I	R	V
Template Known Secondary structure		S		S	S			S																		S	S	S									.		B	T	T	B	S	B			T	T	S	S		S		B										S	S	G	G	G	S							T
Template Predicted Secondary structure																																					.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		81	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	Q	L	R	T	R	K	W	T	D	Q
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		H	.	R	A	T	L	R	L	Y	N	G	Q
Template Known Secondary structure			.								T	T
Template Predicted Secondary structure			.
Template SS confidence
		123		.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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