Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE0
Confidence52.80%DateThu Jan 5 11:28:52 GMT 2012
Rank49Aligned Residues65
% Identity12%Templatec1gm5A_
PDB info PDB header:helicaseChain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction
Resolution3.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRK
Query Conservation 
 
 
 
  

       
       

      
              
      
      
 

  
 
 
 
    
Alig confidence 







.







.








..............






































Template Conservation        
 .        .         .............. 
         
             
      

     
Template Sequence  VTTQGKIV. SVETKKFQ. NMNILTAVL. . . . . . . . . . . . . . SDGLVHVPLKWFNQDYLQTYLKQLTGKEVFVTGTVKSNA
Template Known Secondary structure 



.


S.S
..............

SS


S

TTTT
SS

S

Template Predicted Secondary structure  .


.

..............













Template SS confidence 















































































   168.170..... ....180... ......190.. .......200.........210.........220.........230.
 
   89
Predicted Secondary structure 
Query SS confidence 
Query Sequence  W
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  Y
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   232
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions