Job Description P27844 Confidence 5.00% Date Thu Jan 5 11:44:19 GMT 2012 Rank 14 Aligned Residues 88 % Identity 10% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		P	M	S	L	N	L	L	L	I	A	A	G	I	V	T	T	V	P	L	L	C	F	T	A	A	A	T	R	L	R	L	S	T	L	G	F	F	Q	Y	I	G	P	T	L	M	F	L	L	A	V	T	F	Y	G	E	K	P	G	A	D	K	M	V	T	F	A	F	I	W	V	A	.	.	.	L	A	I	F	V	M
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V
Template Known Secondary structure																									T	T				T	T	T	T	T																			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		286	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	I	Y	T	Q	R	R	T	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	V	E	R	V	M	A	E	E	G
Template Known Secondary structure											T	S
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions