Job Description P27844 Confidence 3.36% Date Thu Jan 5 11:44:19 GMT 2012 Rank 21 Aligned Residues 114 % Identity 12% Template c3rlbA_ PDB info PDB header:thiamine-binding protein Chain: A: PDB Molecule:thit; PDBTitle: crystal structure at 2.0 a of the s-component for thiamin from an ecf-2 type abc transporter Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	G	V	L	L	A	L	A	A	Y	F	I	W	G	I	A	P	A	Y	F	K	L	I	Y	Y	V	P	A	D	E	I	L	T	H	R	V	I	W	S	F	F	F	M	V	V	L	M	S	I	C	R	Q	W	S	Y	L	K	T	L	I	Q	T	P	Q	K	I	F	M	L	A	V	S	A	V	L	I	G	G	N
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		R	R	G	L	T	A	G	L	V	G	G	L	I	W	G	I	L	S	M	I	T	G	H	A	Y	I	L	S	L	S	Q	A	.	F	L	E	Y	L	V	A	P	V	S	L	G	I	A	G	L	F	R	Q	K	T	A	P	L	K	L	A	P	V	L	L	G	T	F	V	A	V	L	L	K	Y	F	F	H	F	I	A
Template Known Secondary structure																						T	T		S			S	S					.					T						G	G	G	G	G	G	G				S	S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		W	L	L	F	I	W	A	.	.	.	V	N	N	H	H	M	L	E	A	S	L	G	Y	F	I	N	P	L	V	N	I	V	L	G	M	I	F	L
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		G	I	I	F	W	S	Q	Y	A	W	K	G	W	G	A	V	A	Y	S	L	A	V	N	G	I	S	G	I	L	T	A	I	A	A	F	V	I	L
Template Known Secondary structure							G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions