Job Description P27844 Confidence 14.83% Date Thu Jan 5 11:44:19 GMT 2012 Rank 6 Aligned Residues 142 % Identity 11% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	T	R	Q	G	V	L	L	A	L	A	A	Y	F	I	W	G	I	A	P	A	Y	F	K	L	I	Y	Y	V	P	A	D	E	I	L	T	H	R	V	I	W	S	F	F	F	M	V	V	L	M	S	I	C	R	Q	W	S	Y	L	K	T	L	I	Q	T	P	Q	K	I	F	M	L	A	V	S	A	V	L
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	.	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S
Template Known Secondary structure				S																						T	T	.											T																			S	S	T	T						T	T		S
Template Predicted Secondary structure																												.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		I	G	G	N	W	L	L	F	I	W	A	V	N	N	H	H	M	L	E	A	S	L	G	Y	F	I	N	P	L	V	N	I	V	L	G	M	I	F	L	G	E	R	F	R	R	M	Q	W	L	A	V	I	L	.	.	A	I	C	G	V	L	V	Q	L	W	T	F	G	S	L
Query Conservation																																																							.	.
Alig confidence																							.	.	.	.	.																												.	.
Template Conservation																							.	.	.	.	.
Template Sequence		A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	.	.	.	.	.	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G
Template Known Secondary structure													T	T	S								.	.	.	.	.													T	T	T	S																												S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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