Job Description P27844 Confidence 6.73% Date Thu Jan 5 11:44:19 GMT 2012 Rank 11 Aligned Residues 187 % Identity 12% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		W	S	F	F	F	M	V	V	L	M	S	I	C	R	Q	W	S	Y	L	K	T	L	I	Q	T	P	Q	K	I	F	M	L	A	V	S	A	V	L	I	G	G	N	W	L	L	F	I	W	A	V	N	N	H	H	M	L	E	A	S	L	G	Y	F	I	N	.	.	.	.	.	.	P	L	V	N	I	V	L	G	M
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	G	L	T	V	T	R	I	L	Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S
Template Known Secondary structure											T			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																									.	.	.	.	.	.	.	.	.
Query SS confidence																										.																									.	.	.	.	.	.	.	.	.
Query Sequence		I	F	L	G	E	R	F	R	R	M	Q	W	L	A	V	I	L	A	I	C	G	V	L	V	.	Q	L	W	T	F	G	S	L	P	I	I	A	L	G	L	A	F	S	F	A	F	Y	G	L	.	.	.	.	.	.	.	.	.	V	R	K	K	I	A	V	E	A	Q	T	G	M	L	I	E	T	M	W	L	L	P
Query Conservation																										.																									.	.	.	.	.	.	.	.	.
Alig confidence																										.																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I
Template Known Secondary structure			T	S	T	T											G	G	G						T	T	T	T	T	T	T		S																																				T	T						T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	I	Y	L	F	A	I	A	D	S	S	T	S	H	M	G	Q	N	P	M	S	L	N	L	L	L	I	A	A	G	I	V	T	T	V	P	L	L	C	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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