Job Description P27844 Confidence 13.02% Date Thu Jan 5 11:44:19 GMT 2012 Rank 7 Aligned Residues 217 % Identity 8% Template c3giaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:uncharacterized protein mj0609; PDBTitle: crystal structure of apct transporter Resolution 2.32 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	T	L	I	Q	T	P	Q	K	I	F	M	L	A	V	S	A	V	L	I	G	G	N	W	L	L	F	I	W	A	V	N	N	H	H	M	L	E	A	S	L	G	Y	F	I	N	P	L	V	N	I	V	L	G	M	I	F	L	G	E	R	F	R	R	M	Q	W	L	A	V	I	L	A	I	C	G	V	L	V
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		E	H	I	E	N	P	K	K	N	V	P	R	A	I	F	I	S	I	L	I	V	M	F	V	Y	V	G	V	A	I	S	A	I	G	N	L	P	I	D	E	L	I	K	A	S	E	N	A	L	A	V	A	A	K	P	F	L	.	.	.	.	.	.	.	.	G	N	L	G	F	L	L	I	S	I	G	A	L	F	S
Template Known Secondary structure		G	G	B	S	S																													T	T	S								T	G	G	G											.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	W	T	F	G	S	L	P	I	I	A	L	G	L	A	F	S	F	A	F	Y	G	L	V	R	K	K	I	A	V	E	A	Q	T	G	M	L	I	E	T	M	W	L	L	P	V	A	A	I	Y	L	F	A	I	A	D	S	S	T	S	H	M	G	Q	N	P	M	S	L	N	L	L	L	I	A	A	G	I	V
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.
Template Sequence		I	S	S	A	M	N	A	T	I	Y	G	G	A	N	V	A	Y	S	L	A	K	D	G	E	L	P	E	F	F	E	R	K	V	W	F	K	S	T	E	G	L	Y	I	T	S	A	L	G	V	L	F	A	L	L	F	.	.	.	.	.	.	.	.	.	N	M	E	G	V	A	S	I	T	S	A	V	F	M	V	I
Template Known Secondary structure											T	T	T											S	S			S	S			T	T	S			S		T																	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.										.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	V	P	L	L	C	F	T	A	A	A	T	R	L	R	L	S	T	L	G	F	F	Q	Y	I	G	P	T	L	M	F	L	L	A	V	T	F	Y	G	E	K	P	G	A	D	K	M	V	T	F	A	F	I	W	V	A	L	A	I	F	V	M	D	A	I	Y	T	Q	R	R	T	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	F	V	I	L	S	H	Y	I	L	I	D	E	V	G	G	R	K	E	I	V	I	F	S	F	I	V	V	L	G	V	F	L	L	L	L	Y	Y	Q	W	I	T	N	R	F	V	F	Y	G	I	I	A	T	F	I	G	V	L	I	F	E	I	I	Y	R	K	V	T	K	R	T	F	S
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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