Job Description P27844 Confidence 68.56% Date Thu Jan 5 11:44:19 GMT 2012 Rank 3 Aligned Residues 87 % Identity 14% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		P	M	S	L	N	L	L	L	I	A	A	G	I	V	T	T	V	P	L	L	C	F	T	A	A	A	T	R	L	R	L	S	T	L	G	F	F	Q	Y	I	G	P	T	L	M	F	L	L	A	V	T	F	Y	G	E	K	P	G	A	D	K	M	V	T	F	A	F	I	W	V	A	L	.	.	.	.	A	I	F	V
Query Conservation																																																																										.	.	.	.
Alig confidence																																																																							.			.	.	.	.
Template Conservation																																																																							.
Template Sequence		G	E	E	L	R	R	N	A	V	M	A	V	L	V	G	L	G	L	I	L	L	Y	V	A	F	R	F	D	W	T	F	G	V	A	S	I	L	A	V	A	H	D	V	A	I	V	A	G	M	Y	S	L	L	G	L	E	F	S	I	P	T	I	A	A	L	L	T	I	V	.	G	Y	S	I	N	D	S	I	V	V
Template Known Secondary structure																												S																											T																.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.		.	.	.	.	.	.	.	.	640	.
		285	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	I	Y	T	Q	R	R	T	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	R	I	R	E	N	Q	K	L	L	R
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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