 |
Job Description | P0C0U4 | Confidence | 39.35% | Date | Thu Jan 5 11:30:01 GMT 2012 |
Rank | 431 | Aligned Residues | 70 |
% Identity | 13% | Template | d1jvna2 |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| Class I glutamine amidotransferases (GAT)
|
Resolution | 2.10 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
M | K | I | A | I | L | S | R | D | G | T | L | Y | S | C | K | R | L | R | E | A | A | I | Q | R | G | H | L | V | E | I | L | D | P | L | S | C | Y | M | N | I | N | P | A | A | S | S | I | H | Y | K | G | R | K | L | P | H | F | D | A | V | I | P | R | I | G | T | A | I | T | F | Y | G | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |
|
|
|   |
|   |   |   | . | . |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|
|
|
| . |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | V | V | H | V | I | D | V | E | S | G | N | . |
. |
L | Q | S | L | T | N | A | I | E | H | L | G | Y | E | V | Q | L | V | K | S | P | K | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | I | S | G | T | S | R | L | I | L | . |
P | G | V | G | N | Y | G | H | F | V | D | N | L | F | N | R |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |
| S |
| . | . |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | S | G | G | G |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | T | T |
| S |
|  |  |  | . |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
  |   |
|
|
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
T | A | A | L | R | Q | F | E | M | L | G | S | Y | P | L |
Query Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
G | F | E | K | P | I | R | E | Y | I | E | S | G | K | P | I | M |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|