Job Description P0C0U4 Confidence 99.98% Date Thu Jan 5 11:30:01 GMT 2012 Rank 28 Aligned Residues 273 % Identity 15% Template c3uvzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	.	.	.	.	.	.	.	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence										.	.	.																																														.	.	.	.	.	.	.							.	.	.	.
Template Conservation										.	.	.																																																											.	.	.	.
Template Sequence		W	L	G	M	V	G	G	G	.	.	.	Q	L	G	R	M	F	C	F	A	A	Q	S	M	G	Y	R	V	A	V	L	D	P	D	P	A	S	P	A	G	A	V	A	D	R	H	L	R	A	A	Y	D	D	E	A	A	L	A	E	L	A	G	L	C	E	A	V	S	T	.	.	.	.	E	F	E	N	V	P	A
Template Known Secondary structure									S	.	.	.													T	T								S		T	T		T	T	T	T	T	S	S					S		T	T													S					.	.	.	.	S		T	T	S
Template Predicted Secondary structure										.	.	.																																																											.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A
Query Conservation
Alig confidence														.																																															.	.
Template Conservation														.																																															.	.
Template Sequence		A	S	L	D	F	L	A	R	T	T	F	V	.	A	P	A	G	R	C	V	A	V	A	Q	D	R	I	A	E	K	R	F	I	E	A	S	G	V	P	V	A	P	H	V	V	I	E	S	A	A	A	L	A	A	L	D	D	A	A	.	.	L	D	A	V	L	P	G	I	L	K	T	A	R	K	G	Q	V	R	V
Template Known Secondary structure									T	T	S			.	S	S										S											T	T			B		S						S						T						.	.			T	T		S
Template Predicted Secondary structure														.																																															.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	.	.	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I
Query Conservation																																								.	.
Alig confidence															.	.																								.	.
Template Conservation															.	.
Template Sequence		S	T	A	R	E	A	R	D	A	H	A	A	L	.	.	G	G	V	P	C	V	L	E	K	R	L	P	L	K	Y	E	V	S	A	L	I	A	R	G	A	D	G	R	S	A	A	F	P	L	A	Q	N	V	H	H	N	G	I	L	A	L	T	I	V	P	A	P	A	A	D	T	A	R	V	E	E	A	Q	Q	A
Template Known Secondary structure			S											T	.	.	T	T																							T	T	S														T	T								S		S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure												.														.															.	.
Query SS confidence												.														.															.	.
Query Sequence		A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	.	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation												.														.															.	.
Alig confidence												.														.															.	.
Template Conservation
Template Sequence		A	V	R	I	A	D	T	L	G	Y	V	G	V	L	C	V	E	F	F	V	L	E	D	G	S	F	V	A	N	E	M	A	P	R	P	H	N	S	G	H	Y	T	V	D	A	C	A	T	S	Q	F	E	Q	Q	V	R	A	M
Template Known Secondary structure										T													T	T	S									S	S			G	G	G	T	T					B	S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions