Job Description P0C0U4 Confidence 98.28% Date Thu Jan 5 11:30:01 GMT 2012 Rank 82 Aligned Residues 177 % Identity 19% Template c3tinA_ PDB info PDB header:ligase Chain: A: PDB Molecule:ttl protein; PDBTitle: tubulin tyrosine ligase Resolution 2.90 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																											.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	.	.	.	.	.	.	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	.	.	.	.	.	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V
Query Conservation																											.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																				.	.	.	.	.																.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		L	V	Q	L	V	N	Y	Y	R	G	A	D	K	L	C	R	K	A	S	L	V	K	L	I	K	T	S	P	E	L	T	E	T	C	T	W	F	P	E	S	Y	V	I	Y	P	E	R	E	E	F	R	S	S	F	N	K	K	K	E	N	E	E	G	N	V	W	I	A	K	S	.	.	.	.	S	S	G	G	I	L
Template Known Secondary structure							S	S		T	T	T					S																T	T			S	S																						T	T	T	S									.	.	.	.	S
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	.	.	.	.	.	.	.	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.															.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		I	S	S	D	A	T	E	L	L	D	F	I	.	.	.	D	N	Q	G	Q	V	H	V	I	Q	K	Y	L	E	S	P	L	L	L	E	P	G	H	R	K	F	D	I	R	S	W	V	L	V	D	N	Q	Y	N	I	Y	L	Y	R	E	G	V	L	R	T	S	S	E	G	N	E	M	F	F	E	E	F	N	Q	Y
Template Known Secondary structure				S		T					T	T	S	.	.	.	T	T	T	T	S									S	S	B			B	T	T	T	T	B												T	T							S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
			214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.													.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.																													.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		.	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	A	G	V	D	I	L	R	A	N	R	G	.	P	L	V	M	E	V	N	A	S	P	G	L
Query Conservation		.																													.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		L	V	T	S	L	N	I	N	L	E	N	S	I	L	C	Q	I	K	E	I	I	R	V	C	L	S	C	L	E	P	A	I	S	T	K	Y	L	P	Y	H	S	F	Q	L	F	G	F	D	F	M	V	D	K	N	L	K	V	W	L	I	E	V	N	G	A	P	A	C
Template Known Secondary structure		T	T	S	S	S	S	S		T	T	T	T															T	T							S	S	S	S	S													B	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions