Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 10 Aligned Residues 283 % Identity 16% Template c3se7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:vana; PDBTitle: ancient vana Resolution 3.07 Å

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		1	.	.	.	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	.	.	.	.	.	.	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	I	G	I	I	F	G	G	V	S	E	E	H	D	I	S	V	K	S	A	R	E	V	A	T	H	L	G	T	G	V	F	E	P	F	Y	L	G	I	T	K	S	G	A	W	Q	L	C	D	G	P	G	E	N	W	E	D	G	N	C	R	P	A	V	L	S	P	D	R	S	V	H	G	L	L	V	L	E	Q
Template Known Secondary structure											S	S	T	T															S		T	T	T										T	T	S						S		S	S	S	S	S	S	S	S											T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
								57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																	.
Query SS confidence		.	.	.	.	.	.																																	.
Query Sequence		.	.	.	.	.	.	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L
Query Conservation		.	.	.	.	.	.																																	.
Alig confidence		.	.	.	.	.	.																	.																.																																							.	.	.
Template Conservation																								.																																																							.	.	.
Template Sequence		G	K	Y	E	T	I	R	L	D	L	V	L	P	V	L	H	G	K	L	G	E	D	.	G	A	I	Q	G	L	L	E	L	S	G	I	P	Y	V	G	C	D	I	Q	S	S	A	L	C	M	D	K	S	L	T	Y	L	V	A	R	S	A	G	I	A	T	P	N	F	W	T	V	T	A	D	E	K	I	.	.	.
Template Known Secondary structure		T								S								S	T	T	T	T	S	.	S													B	S	S											S											T	T		B									T	T	S			.	.	.
Template Predicted Secondary structure																								.																																																							.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		P	T	D	Q	L	T	Y	P	V	F	V	K	P	A	R	S	G	S	S	F	G	V	S	K	V	A	R	E	E	D	L	Q	G	A	V	E	A	A	R	E	Y	D	S	K	V	L	I	E	E	A	V	I	G	T	E	I	G	C	A	V	M	G	N	.	G	P	E	L	I	T	G	E	V	D	Q	I	T	L	S	G
Template Known Secondary structure			T	T	T			S	S						S	S			T	T	T	T						S												T	T	T		S										S											.	T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																			.														.												.	.	.	.	.	.
Query SS confidence																																			.														.												.	.	.	.	.	.
Query Sequence		F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	.	P	L	V	M	E	V	N	A	S	P	G	.	.	.	.	.	.	L	E	G	I	E	K	T	T	G	I	D	I	A	G	K
Query Conservation																																			.														.												.	.	.	.	.	.
Alig confidence																																			.														.												.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	N	S	A	V	T	V	P	A	D	I	S	T	T	S	R	S	L	V	Q	D	T	A	K	A	V	Y	R	A	L	G	C	R	G	L	S	R	V	D	L	F	L	T	E	D	G	K	V	V	L	N	E	V	N	T	F	P	G	M	T	S	Y	S	R	Y	P	R	M	M	T	A	A	G	L	S	R	A	D	V
Template Known Secondary structure		G	G	G	S				S	S																							T													T	T	S									S	S				S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	R	W	I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	R	L	V	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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