Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 18 Aligned Residues 280 % Identity 16% Template c3ouzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																	.	.	60	.	.
Predicted Secondary structure																																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	.	.	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	V	I
Query Conservation																																		.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																			.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		I	K	S	I	L	I	A	N	R	G	E	I	.	.	A	L	R	A	L	R	T	I	K	E	X	G	K	K	A	I	C	V	Y	S	E	A	D	K	D	A	L	Y	L	K	Y	A	D	A	S	I	C	I	G	K	A	R	S	S	E	S	Y	L	N	I	P	A	I	I	A	A	A	E	I	A	E	A	D	A	I	F
Template Known Secondary structure														.	.											T	T									G	G	G	T	T		T					S	S									T	T	T	T	G	G	G													T		S
Template Predicted Secondary structure														.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																															.	.
Query SS confidence																												.																															.	.
Query Sequence		P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	.	.	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V
Query Conservation																												.																															.	.
Alig confidence															.	.												.																															.	.																.
Template Conservation															.	.																																																												.
Template Sequence		P	G	Y	G	F	L	S	E	N	Q	N	F	V	.	.	E	I	C	A	K	H	N	I	K	F	I	G	P	S	V	E	A	X	N	L	X	S	D	K	S	K	A	K	Q	V	X	Q	R	A	G	V	P	V	I	P	G	S	D	G	A	L	A	G	A	E	A	A	K	K	L	A	K	E	I	.	G	Y	P	V	I
Template Known Secondary structure				S	S	T	T	T	T						.	.						T	T				S	S											S											T	T			B		S	B		S	S	S			S												.		S	S
Template Predicted Secondary structure															.	.																																																												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																		.	.	.	.	.	.																									.	.
Query SS confidence																																		.	.	.	.	.	.																									.	.
Query Sequence		V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	.	.	.	.	.	.	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	.	.	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R
Query Conservation																																		.	.	.	.	.	.																									.	.
Alig confidence																																		.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		L	K	A	A	A	G	G	G	G	R	G	X	R	V	V	E	N	E	K	D	L	E	K	A	Y	W	S	A	E	S	E	A	X	T	A	F	G	D	G	T	X	Y	X	E	K	Y	I	Q	N	P	R	H	I	E	V	Q	V	I	G	D	S	F	G	N	V	I	H	V	G	E	R	D	C	S	X	Q	R	R	H	Q
Template Known Secondary structure					T	T			T	T		S						S	G	G	G																	S											S	S												T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure											.																							.														.															.	.
Query SS confidence											.																							.														.															.	.
Query Sequence		S	N	L	H	R	G	G	A	A	.	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	.	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W
Query Conservation											.																							.														.															.	.
Alig confidence											.																							.														.															.	.
Template Conservation
Template Sequence		K	L	I	E	E	S	P	A	I	L	L	D	E	K	T	R	T	R	L	H	E	T	A	I	K	A	A	K	A	I	G	Y	E	G	A	G	T	F	E	F	L	V	D	K	N	L	D	F	Y	F	I	E	X	N	T	R	L	Q	V	E	H	C	V	S	E	X	V	S	G	I	D	I	I	E	Q	X	I	K	V
Template Known Secondary structure								S		T	T	S																			T	T													T	T										S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions