Job Description P0C0U4 Confidence 99.97% Date Thu Jan 5 11:30:01 GMT 2012 Rank 33 Aligned Residues 277 % Identity 17% Template c3gidB_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa2 carboxylase 2 (acc2) in complex with soraphen a Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	.	.	.	.	.	.	.	.	.	G	H	L	V	E	I	L	.	.	.	.	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.														.	.	.	.	.	.	.	.	.								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.
Template Sequence		K	V	L	I	A	N	N	G	.	.	.	I	A	A	V	K	C	M	R	S	I	R	R	W	A	Y	E	M	F	R	N	E	R	A	I	R	F	V	V	M	V	T	P	E	D	L	K	A	N	A	E	Y	I	K	M	A	D	H	Y	V	P	V	P	G	G	P	N	N	N	N	Y	A	N	V	E	L	I	V	D	I
Template Known Secondary structure										.	.	.																			S		T	T	S	S														T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
							58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.
Predicted Secondary structure		.	.	.	.	.																															.																																.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																															.																																.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	.	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	.	.	.	.	.	.	.	.	.	I	A	H	S
Query Conservation		.	.	.	.	.																															.																																.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																			.	.											.																																.	.	.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		A	K	R	I	P	V	Q	A	V	W	A	G	W	G	H	A	S	E	N	P	K	L	P	.	.	E	L	L	C	K	N	G	V	A	F	L	G	P	P	S	E	A	M	W	A	L	G	D	K	I	A	S	T	V	V	A	Q	T	L	Q	V	P	T	L	P	W	S	G	S	G	L	T	V	E	K	G	C	V	K	D
Template Known Secondary structure					T	T		S						S	S	T	T	T	T		T				.	.						T	T				S	S									T	T	S											T	T			B			B	T	T	T	T								B		S
Template Predicted Secondary structure																									.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E
Query Conservation
Alig confidence													.																																					.
Template Conservation													.																																					.
Template Sequence		V	D	E	G	L	E	A	A	E	R	I	.	G	F	P	L	M	I	K	A	S	E	G	K	G	I	R	K	A	E	S	A	E	D	F	P	I	L	F	R	Q	V	Q	S	E	I	P	G	.	S	P	I	F	L	M	K	L	A	Q	H	A	R	H	L	E	V	Q	I	L	A	D	Q	Y	G	N	A	V	S	L	F
Template Known Secondary structure													.		S	S																S	T	T	T												S	T	T	.										S	S												S	S	S
Template Predicted Secondary structure													.																																					.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.														.															.	.
Query SS confidence																																										.														.															.	.
Query Sequence		R	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	.	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I
Query Conservation																																										.														.															.	.
Alig confidence																																										.														.															.	.
Template Conservation
Template Sequence		G	R	D	C	S	I	Q	Q	K	I	V	E	E	A	P	A	T	I	A	P	L	A	I	F	E	F	M	E	Q	C	A	I	R	L	A	K	T	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S	Q	D	G	S	F	H	F	L	E	L	N	P	R	L	Q	V	E	H	P	C	T	E	M	I	A	D	V	N	L
Template Known Secondary structure																S			S	S																			T	T													S	S	S										S			T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		279	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	M	I	R	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	A	Q	L	Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		601	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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