Job Description P0C0U4 Confidence 99.93% Date Thu Jan 5 11:30:01 GMT 2012 Rank 55 Aligned Residues 249 % Identity 19% Template c3df7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative atp-grasp superfamily protein; PDBTitle: crystal structure of a putative atp-grasp superfamily2 protein from archaeoglobus fulgidus Resolution 1.87 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.					.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.							.	.	.	.												.	.	.
Query SS confidence							.	.	.	.							.	.	.	.												.	.	.
Query Sequence		M	K	I	A	I	.	.	.	.	L	S	R	D	G	T	.	.	.	.	L	Y	S	C	K	R	L	R	E	A	A	.	.	.	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I
Query Conservation							.	.	.	.							.	.	.	.												.	.	.
Alig confidence							.	.	.	.							.	.	.	.												.	.	.																																									.
Template Conservation																																																																											.
Template Sequence		L	K	L	F	L	F	E	F	A	T	C	G	E	R	I	E	D	S	T	A	V	E	G	L	A	X	F	K	S	A	F	D	G	F	K	N	Y	Y	E	I	T	G	F	V	R	P	E	F	S	C	L	F	T	L	P	V	D	S	X	D	S	X	E	K	Y	L	E	K	S	D	A	F	L	.	I	I	A	P	E	D
Template Known Secondary structure													S	S																						T	T	T	S						B		G	G	G	T	T	T	S	S	S		B			G	G	G						T	T		S				.						G
Template Predicted Secondary structure																																																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I
Query Conservation
Alig confidence																																								.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	L	Y	T	L	T	K	K	A	E	K	Y	C	E	N	L	G	S	S	S	R	A	I	A	V	T	S	D	K	W	E	L	Y	K	K	L	.	R	G	E	V	Q	V	P	Q	T	S	L	R	P	.	.	.	.	.	.	.	.	.	.	.	.	L	D	C	K	F	I	I	K	P	R	T	A	C	I	G	F
Template Known Secondary structure		G	G											T	T	S			S	S										T	S									.	T	T	T	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.		S	S	S						S	S				B
Template Predicted Secondary structure																																								.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		S	D	E	V	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	Q	E	F	I	E	G	I	N	L	S	V	S	L	A	.	.	V	G	E	D	V	K	C	L	S	V	N	E	Q	I	I	N	N	F	R	Y	A	G	A	V	V	P	A	R	I	S	D	E	V	K	R	E	V
Template Known Secondary structure			S	S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S									.	.		S	S	S													T	T								S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		152	.	.	.	.	.	.																		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		230	.	.	.	.	.	.	.	.	.	240	.		.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure														.		.																									.	.
Query SS confidence														.		.																									.	.
Query Sequence		R	E	I	A	I	K	A	A	R	T	M	A	.	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	.	.	L	E	G	I	E	K	T	T	G	I	D	I	A	G	K	M	I
Query Conservation														.		.																									.	.
Alig confidence														.		.											.														.	.
Template Conservation																											.
Template Sequence		V	E	E	A	V	R	A	V	E	C	V	E	G	L	N	G	Y	V	G	V	D	I	V	Y	S	.	D	Q	P	Y	V	I	E	I	N	A	R	L	T	T	P	V	V	A	F	S	R	A	Y	G	A	S	V	A	D	L	L	A
Template Known Secondary structure										T	T	S	T	T												S	.	S	S								S	S			G	G	G	G	G						S								T
Template Predicted Secondary structure																											.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions