Job Description P0C0U4 Confidence 99.93% Date Thu Jan 5 11:30:01 GMT 2012 Rank 52 Aligned Residues 229 % Identity 14% Template c2z04A_ PDB info PDB header:lyase Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F
Query Conservation
Alig confidence											.	.	.																																					.	.	.	.	.
Template Conservation											.	.	.																																					.	.	.	.	.
Template Sequence		L	T	V	G	I	L	G	G	G	.	.	.	Q	L	G	W	X	T	I	L	E	G	R	K	L	G	F	K	F	H	V	L	E	D	K	E	N	A	P	A	C	R	V	A	D	R	C	F	.	.	.	.	.	R	T	G	Q	I	S	E	F	V	D	S	C	D	I	I	T	Y	E	F	E	H	I	K	D	E	V	L
Template Known Secondary structure										S	.	.	.											G	G	G	T								S	S	S	S							S	S				.	.	.	.	.		G	G	G									S					S	S	S
Template Predicted Secondary structure											.	.	.																																					.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	L	G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	C	E	S	K	L	I	P	N	P	Q	A	L	Y	V	K	K	S	R	I	R	E	K	L	F	L	K	K	H	G	F	P	V	P	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	P	V	V	I	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T	B	S	S		T							T											T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	F	I	I	E	E	F	V	K	F	E	A	E	I	S	C	I	G	V	R	D	R	E	G	K	T	Y	F	Y	P	Q	P	F	N	.	.	.	K	H	E	E	G	I	L	I	Y	N	Y	V	P	Y	A	K	L	K	E	A	E	E	I	T	K	R	L	X	E	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.											S											T	T												.	.	.				T	T																										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
														134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		241	.		.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure				.														.															.	.
Query SS confidence				.														.															.	.
Query Sequence		A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	.	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation				.														.															.	.
Alig confidence				.														.															.	.
Template Conservation
Template Sequence		D	I	V	G	V	F	T	V	E	F	F	L	L	K	D	G	R	V	L	I	N	E	F	A	P	R	V	H	N	T	G	H	W	T	L	D	G	A	Y	T	S	Q	F	E	N	L	L	R	A	I
Template Known Secondary structure		T													T	T	S									S	S			G	G	G	T	T					B	S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions