Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 25 Aligned Residues 279 % Identity 17% Template c2yyaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of gar synthetase from aquifex aeolicus Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																										.	.																		.	.	.	.	.	.
Query SS confidence																										.	.																		.	.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	.	.	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	.	.	.	.	.	.	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y
Query Conservation																										.	.																		.	.	.	.	.	.
Alig confidence														.	.	.										.	.																		.	.	.	.	.	.																							.	.	.
Template Conservation														.	.	.																																																									.	.	.
Template Sequence		M	K	V	L	V	V	G	N	G	G	R	E	.	.	.	H	A	I	A	W	K	V	A	Q	S	P	L	V	K	E	L	Y	V	A	K	G	N	A	G	I	W	E	I	A	K	R	V	D	I	S	P	T	D	V	E	K	L	A	E	F	A	K	N	E	G	V	D	F	T	I	V	.	.	.	G	P	E	A	P	L
Template Known Secondary structure										S				.	.	.								T	T	S	T	T		S						S			T	T	G	G	G	T	S					S		T	T													T		S					.	.	.		S	S
Template Predicted Secondary structure														.	.	.																																																									.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V
Query Conservation																		.
Alig confidence																		.																																														.
Template Conservation																																																																.
Template Sequence		V	E	G	I	V	D	E	F	E	K	R	G	L	K	I	F	G	P	N	K	E	A	A	K	L	E	G	S	K	A	F	A	K	T	F	M	K	K	Y	G	I	P	T	A	R	Y	E	V	F	T	D	F	E	K	A	K	E	Y	V	E	K	V	.	G	A	P	I	V	V	K	A	D	G	L	A	A	G	K	G	A
Template Known Secondary structure			T	T								T	T					S			T	T	T	T																	T			B							S										T	T	T	.		S	S						S	S		S	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	.	.	.	.	.	.	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L	H	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	C	E	T	V	E	K	A	I	E	T	L	D	R	F	L	N	K	K	I	F	G	K	S	S	E	R	V	V	I	E	E	F	L	E	G	E	E	A	S	Y	I	V	M	I	N	G	D	R	Y	V	P	L	P	T	S	Q	D	H	K	R	L	L	D	E	D	K	G	P	N	T	G	G	M	G	A	Y	S	P
Template Known Secondary structure						S													T	S			S	T	T	T	S	S	S																				T	T								B								T	T	T						S		S					S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
				216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.																												.	.	.																												.	.	.
Query SS confidence		.	.																												.	.	.																												.	.	.
Query Sequence		.	.	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	.	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation		.	.																												.	.	.																												.	.	.
Alig confidence		.	.																												.	.	.																												.	.	.
Template Conservation
Template Sequence		T	P	V	I	N	E	E	V	E	K	R	I	R	E	E	I	V	E	R	V	I	K	G	L	K	E	E	G	I	Y	Y	R	G	F	L	Y	A	G	L	M	I	T	K	E	G	P	K	V	L	E	F	N	V	R	L	G	D	P	E	A	Q	P	I	L	M	R	V	K	N	D	F	L	E	T	L	L	N	F	Y
Template Known Secondary structure			T	T	S												T											T	T															T	T									S	S			T	T	T							T	B		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions