Job Description P0C0U4 Confidence 99.96% Date Thu Jan 5 11:30:01 GMT 2012 Rank 41 Aligned Residues 279 % Identity 18% Template c2ys6A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase; PDBTitle: crystal structure of gar synthetase from geobacillus kaustophilus Resolution 2.21 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																												.	.																.	.	.	.	.	.
Query SS confidence																												.	.																.	.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	.	.	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	.	.	.	.	.	.	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y
Query Conservation																												.	.																.	.	.	.	.	.
Alig confidence														.	.	.												.	.																.	.	.	.	.	.																							.	.	.
Template Conservation														.	.	.																																																									.	.	.
Template Sequence		M	N	V	L	V	I	G	R	G	G	R	E	.	.	.	H	A	I	A	W	K	A	A	Q	S	P	L	V	G	K	L	Y	V	A	P	G	N	P	G	I	A	D	V	A	E	L	V	H	I	D	E	L	D	I	E	A	L	V	Q	F	A	K	Q	Q	A	I	D	L	T	I	V	.	.	.	G	P	E	A	P	L
Template Known Secondary structure									S	S				.	.	.								T	T		T	T											T	T	G	G	G	T	S							T	T												T	T							.	.	.		S
Template Predicted Secondary structure														.	.	.																																																									.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V
Query Conservation																		.
Alig confidence																		.																																														.
Template Conservation																																																																.
Template Sequence		A	S	G	I	V	D	R	F	M	A	E	G	L	R	I	F	G	P	S	Q	R	A	A	L	I	E	G	S	K	A	F	A	K	E	L	M	K	K	Y	G	I	P	T	A	D	H	A	A	F	T	S	Y	E	E	A	K	A	Y	I	E	Q	K	.	G	A	P	I	V	I	K	A	D	G	K	G	V	T	V	A	Q
Template Known Secondary structure			T	T								T	T					S																							T			B							S													.		S	S														S
Template Predicted Secondary structure																																																																.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																		.	.	.
Query SS confidence																					.	.																																		.	.	.
Query Sequence		V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	.	.	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	.	.	.	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T
Query Conservation																					.	.																																		.	.	.
Alig confidence																					.	.																																		.	.	.
Template Conservation
Template Sequence		T	V	E	E	A	L	A	A	A	K	A	A	L	V	D	G	Q	F	G	T	A	G	S	Q	V	V	I	E	E	Y	L	E	G	E	E	F	S	F	M	A	F	V	N	G	E	K	V	Y	P	L	A	I	A	Q	D	H	K	R	A	Y	D	G	D	E	G	P	N	T	G	G	M	G	A	Y	S	P	V	P	Q	I
Template Known Secondary structure		S															S			B	T	T	B											S											T	T								B								T	T	T						S		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
											227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.	.	.																												.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.	.	.																												.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	.	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation		.	.	.	.	.	.	.	.	.																	.	.	.																												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.	.	.																												.	.	.
Template Conservation
Template Sequence		S	D	E	M	M	D	A	A	L	E	A	I	L	R	P	A	A	K	A	L	A	A	E	G	R	P	F	L	G	V	L	Y	A	G	L	M	A	T	A	N	G	P	K	V	I	E	F	N	A	R	F	G	D	P	E	A	Q	V	V	L	P	R	L	K	T	D	L	V	E	A	V	L	A	V	M
Template Known Secondary structure													T											T	T															T	T									S	S			T	T						G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions