Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 23 Aligned Residues 279 % Identity 20% Template c2xd4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase Resolution 2.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																										.	.																		.	.	.	.	.	.
Query SS confidence																										.	.																		.	.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	.	.	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	.	.	.	.	.	.	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y
Query Conservation																										.	.																		.	.	.	.	.	.
Alig confidence														.	.	.										.	.																		.	.	.	.	.	.																							.	.	.
Template Conservation														.	.	.																																																									.	.	.
Template Sequence		M	N	V	L	I	I	G	K	G	G	R	E	.	.	.	H	T	L	A	W	K	A	A	Q	S	S	L	V	E	N	V	F	A	A	P	G	N	D	G	M	A	A	S	A	Q	L	V	N	I	E	E	S	D	H	A	G	L	V	S	F	A	K	Q	N	Q	V	G	L	T	I	V	.	.	.	G	P	E	V	P	L
Template Known Secondary structure									S	S				.	.	.									T		T	T		S									G	G	G	T	T	T								T	T												T	T							.	.	.		S
Template Predicted Secondary structure														.	.	.																																																									.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V
Query Conservation																		.
Alig confidence																		.																																														.
Template Conservation																																																																.
Template Sequence		I	E	G	L	V	D	E	F	E	K	A	G	L	H	V	F	G	P	S	K	A	A	A	I	I	E	G	S	K	Q	F	A	K	D	L	M	K	K	Y	D	I	P	T	A	E	Y	E	T	F	T	S	F	D	E	A	K	A	Y	V	Q	E	K	.	G	A	P	I	V	I	K	A	D	G	L	A	A	G	K	G	V
Template Known Secondary structure			T	T								T	T					S			T	T	T	T																T	T			B							S													.		S	S						S	S		G	G	G
Template Predicted Secondary structure																																																																.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																					.	.	.	.	.	.																																		.	.	.
Query SS confidence																					.	.	.	.	.	.																																		.	.	.
Query Sequence		V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	.	.	.	.	.	.	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	.	.	.	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V
Query Conservation																					.	.	.	.	.	.																																		.	.	.
Alig confidence																					.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		T	V	A	M	T	E	E	E	A	I	A	C	L	H	D	F	L	E	D	E	K	F	G	D	A	S	A	S	V	V	I	E	E	Y	L	S	G	E	E	F	S	L	M	A	F	V	K	G	E	K	V	Y	P	M	V	I	A	Q	D	H	K	R	A	F	D	G	D	K	G	P	N	T	G	G	M	G	A	Y	S	P
Template Known Secondary structure					S	S												T	T	S		T	T	T	T	T	T	S	S									S											T	T								B								T	T	T						S		S					S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		223	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.																			.	.	.																												.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.																			.	.	.																												.	.	.
Query Sequence		A	S	.	.	.	.	.	.	.	.	.	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	.	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation				.	.	.	.	.	.	.	.	.																			.	.	.																												.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																			.	.	.																												.	.	.
Template Conservation
Template Sequence		V	P	Q	I	S	E	E	T	V	R	H	A	V	E	T	I	V	K	P	A	A	K	A	M	V	Q	E	G	R	S	F	T	G	V	L	Y	A	G	L	M	L	T	E	N	G	S	K	V	I	E	F	N	A	R	F	G	D	P	E	T	Q	V	V	L	P	R	M	E	S	D	L	V	Q	V	L	L	D	L	L
Template Known Secondary structure			T	T	S												T										T	T	T															T	T									S	S			T	T						G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions