Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 22 Aligned Residues 278 % Identity 15% Template c2vpqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:acetyl-coa carboxylase; PDBTitle: crystal structure of biotin carboxylase from s. aureus2 complexed with amppnp Resolution 2.1 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																			.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	K	L	P	H	F	D	A	V	I	P
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.
Template Sequence		K	V	L	I	A	N	.	.	.	R	G	E	I	A	V	R	I	I	R	A	C	R	D	L	G	I	Q	T	V	A	I	Y	S	E	G	D	K	D	A	L	H	T	Q	I	A	D	E	A	Y	C	V	G	P	T	L	S	K	D	S	Y	L	N	I	P	N	I	L	S	I	A	T	S	T	G	C	D	G	V	H	P
Template Known Secondary structure								.	.	.															T	T									G	G	G	T	T							S	S								S	S	G	G	G	T	T	T												T	T		S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		3	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																										.																																.	.
Query SS confidence																										.																																.	.
Query Sequence		R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	.	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	.	.	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V
Query Conservation																										.																																.	.
Alig confidence										.	.															.																																.	.																.
Template Conservation										.	.																																																																.
Template Sequence		G	Y	G	F	L	A	E	N	.	.	A	D	F	A	E	L	C	E	A	C	Q	L	K	F	I	G	P	S	Y	Q	S	I	Q	K	M	G	I	K	D	V	A	K	A	E	M	I	K	A	N	V	P	V	V	P	G	S	D	G	L	M	K	D	V	S	E	A	K	K	I	A	K	K	I	.	G	Y	P	V	I	I
Template Known Secondary structure			S	S	T	T	T	T		.	.									T	T	T				S	S	S										S											T	T			B		S	B		S	S		B	S													.		S	S
Template Predicted Secondary structure										.	.																																																																.
Template SS confidence
		80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	.	.	.	.	.	.	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L
Query Conservation																																.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	T	A	G	G	G	G	K	G	I	R	V	A	R	D	E	K	E	L	E	T	G	F	R	M	T	E	Q	E	A	Q	T	A	F	G	N	G	G	L	Y	M	E	K	F	I	E	N	F	R	H	I	E	I	Q	I	V	G	D	S	Y	G	N	V	I	H	L	G	E	R	D	C	T	I	Q	R	R	M	Q	K
Template Known Secondary structure				T	T			T	T		S					S	S																				S												S												T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		215				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure			.	.	.																												.										.	.																			.	.
Query SS confidence			.	.	.																												.										.	.																			.	.
Query Sequence		H	.	.	.	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	.	.	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W
Query Conservation			.	.	.																												.										.	.																			.	.
Alig confidence			.	.	.																												.										.	.																			.	.
Template Conservation
Template Sequence		L	V	E	E	A	P	S	P	I	L	D	D	E	T	R	R	E	M	G	N	A	A	V	R	A	A	K	A	V	N	Y	E	N	A	G	T	I	E	F	I	Y	D	L	N	D	N	K	F	Y	F	M	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	V	T	G	I	D	L	V	K	L	Q	L	Q	V
Template Known Secondary structure							S		T	T																				T	T													T	T	T	T										S			T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions