Job Description P0C0U4 Confidence 98.43% Date Thu Jan 5 11:30:01 GMT 2012 Rank 79 Aligned Residues 229 % Identity 12% Template c2pbzC_ PDB info PDB header:ligase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of an imp biosynthesis protein purp from2 thermococcus kodakaraensis Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.																																														.	.
Query SS confidence																																.	.	.																																														.	.
Query Sequence		I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	.	.	.	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	.	.
Query Conservation																																.	.	.																																														.	.
Alig confidence								.	.	.	.																					.	.	.																		.	.	.	.	.																								.	.
Template Conservation								.	.	.	.																																									.	.	.	.	.
Template Sequence		V	S	T	I	A	S	.	.	.	.	H	S	S	L	Q	I	L	L	G	A	K	K	E	G	F	K	T	R	L	Y	V	S	P	K	R	R	P	F	Y	S	S	L	P	I	V	D	D	L	V	V	.	.	.	.	.	A	E	E	X	T	S	I	L	N	D	D	G	I	V	V	P	H	G	S	F	V	A	Y	L	G
Template Known Secondary structure						S	S	.	.	.	.	T	T											T	T									T	T	T						T		T	T		S					.	.	.	.	.		S		S			T	T			S	S	B				B	T	T					S
Template Predicted Secondary structure								.	.	.	.																																									.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	Q	F	E	M	L	G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T
Query Conservation		.
Alig confidence		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	A	I	E	K	A	K	A	R	F	F	G	N	R	R	F	L	K	W	E	T	T	F	E	L	Q	D	K	A	L	E	G	A	G	I	P	R	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	P	E	D	A	K	P	D	E	L	Y	F	V	R	I	E
Template Known Secondary structure							T			S			B	S		S	S	G	G	G	G	G	S												T	T			B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B			S					S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																									.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	.	.	.	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	.	.	.	.	.	.	.	.	.	S	N	L	H	R	G	G	A	A	S	V	A	S
Query Conservation																																									.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																									.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		G	S	E	L	E	E	R	L	.	.	.	.	.	.	.	S	P	Y	R	V	E	R	F	I	P	G	V	Y	L	Y	V	H	F	F	Y	S	P	I	L	E	R	L	E	L	L	G	V	D	E	R	V	L	I	A	D	G	N	A	R	W	P	V	K	P	L	P	Y	T	I	V	G	N	R	A	I	A	L	R	E	S
Template Known Secondary structure						S				.	.	.	.	.	.	.											S											T	T	T	T													T	T		S	S	S	S	S			S																G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270
Predicted Secondary structure																		.	.	.	.	.	.			.																							.
Query SS confidence																		.	.	.	.	.	.			.																							.
Query Sequence		I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	.	.	.	.	.	.	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	.	P	G	L	E	G	I
Query Conservation																		.	.	.	.	.	.			.																							.
Alig confidence																		.	.	.	.	.	.			.													.										.
Template Conservation																																							.
Template Sequence		L	L	P	Q	L	Y	D	Y	G	L	A	F	V	R	T	X	R	E	L	E	P	P	G	V	I	G	P	F	A	L	H	F	A	Y	D	G	S	.	F	K	A	I	G	I	A	S	R	I	D	G	G	S	N	A
Template Known Secondary structure		G																			S	T	T				S									S	S	S	.								S	S	B		S	G	G	G	S
Template Predicted Secondary structure																																							.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions