Job Description P0C0U4 Confidence 99.97% Date Thu Jan 5 11:30:01 GMT 2012 Rank 37 Aligned Residues 280 % Identity 17% Template c2ip4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8 Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.																			.	.	.	.	.
Query SS confidence																										.	.																			.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	.	.	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	.	.	.	.	.	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G
Query Conservation																										.	.																			.	.	.	.	.
Alig confidence															.	.	.									.	.																			.	.	.	.	.																						.	.	.
Template Conservation															.	.	.																																																							.	.	.
Template Sequence		X	K	V	L	V	V	G	S	G	G	R	E	H	.	.	.	A	L	L	W	K	A	A	Q	S	P	R	V	K	R	L	Y	A	A	P	G	N	A	G	X	E	A	L	A	E	L	V	P	W	N	G	D	V	E	A	L	A	D	W	A	L	A	E	G	I	D	L	T	L	V	.	.	.	G	P	E	A	P	L	V
Template Known Secondary structure									S	S					.	.	.								T		S	S											T	T	G	G	G	T	S							S													T							.	.	.		S	S
Template Predicted Secondary structure															.	.	.																																																							.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V
Query Conservation																	.
Alig confidence																	.																																														.
Template Conservation																																																															.
Template Sequence		E	G	I	A	D	A	F	Q	A	R	G	L	L	L	F	G	P	T	Q	K	A	A	X	I	E	G	S	K	A	F	A	K	G	L	X	E	R	Y	G	I	P	T	A	R	Y	R	V	F	R	E	P	L	E	A	L	A	Y	L	E	E	V	.	G	V	P	V	V	V	K	D	S	G	L	A	A	G	K	G	V	T
Template Known Secondary structure		T	T									T					S																						T				B							S	S												.		S	S						T	T	S		S	S	T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																				.	.																																					.	.	.																					.
Query SS confidence																				.	.																																					.	.	.																					.
Query Sequence		L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	.	.	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	.	.	.	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	.
Query Conservation																				.	.																																					.	.	.																					.
Alig confidence																				.	.																																					.	.	.																					.
Template Conservation
Template Sequence		V	A	F	D	L	H	Q	A	K	Q	A	V	A	N	I	L	N	R	A	E	G	G	E	V	V	V	E	E	Y	L	E	G	E	E	A	T	V	L	A	L	T	D	G	E	T	I	L	P	L	L	P	S	Q	D	H	K	R	L	L	D	G	D	Q	G	P	X	T	G	G	X	G	A	V	A	P	Y	P	X	D	E
Template Known Secondary structure				S													T	T	S	S	S												S										S	S	S								B								T	T	T						S		S					S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
									227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																	.	.	.																												.	.	.
Query SS confidence		.	.	.	.	.	.	.																	.	.	.																												.	.	.
Query Sequence		.	.	.	.	.	.	.	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	.	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I	E
Query Conservation		.	.	.	.	.	.	.																	.	.	.																												.	.	.
Alig confidence		.	.	.	.	.	.	.																	.	.	.																												.	.	.
Template Conservation
Template Sequence		A	T	L	R	R	V	E	E	E	I	L	G	P	L	V	R	G	L	R	A	E	G	V	V	Y	R	G	V	V	Y	A	G	L	X	L	T	R	E	G	P	K	V	L	E	F	N	A	R	F	G	D	P	E	A	Q	A	L	L	P	L	L	E	N	D	L	V	E	L	A	L	R	V	A	E
Template Known Secondary structure											T											T	T															S	S									S	S			T	T						T	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions