Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 8 Aligned Residues 280 % Identity 16% Template c2dzdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																				.	.	60	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	V
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		I	R	K	V	L	V	A	N	R	G	E	I	.	.	A	I	R	V	F	R	A	C	T	E	L	G	I	R	T	V	A	I	Y	S	K	E	D	V	G	S	Y	H	R	Y	K	A	D	E	A	Y	L	V	G	E	G	K	K	P	I	E	A	Y	L	D	I	E	G	I	I	E	I	A	K	A	H	D	V	D	A	I
Template Known Secondary structure			S											.	.											T	T									G	G	G	G	G		G	G	G	G	G	S	S						S	T	T	S						T	T												T	T
Template Predicted Secondary structure														.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.																																.	.
Query SS confidence																												.																																.	.
Query Sequence		I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	.	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	.	.	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L
Query Conservation																												.																																.	.
Alig confidence																.	.											.																																.	.																.
Template Conservation																.	.																																																												.
Template Sequence		H	P	G	Y	G	F	L	S	E	N	I	Q	F	A	.	.	K	R	C	R	E	E	G	I	I	F	I	G	P	N	E	N	H	L	D	M	F	G	D	K	V	K	A	R	H	A	A	V	N	A	G	I	P	V	I	P	G	S	D	G	P	V	D	G	L	E	D	V	V	A	F	A	E	A	H	.	G	Y	P	I
Template Known Secondary structure					S	S	S	S	T	T						.	.						T	T				S	S										T	S										T	T	T			B			B		S	S			S	S												.		S
Template Predicted Secondary structure																.	.																																																												.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	.	.	.	A	K	E	G	D	F	R	S	N	L	H
Query Conservation																																																																				.	.	.
Alig confidence																																																																				.	.	.
Template Conservation
Template Sequence		I	I	K	A	A	L	G	G	G	G	R	G	M	R	I	V	R	S	K	S	E	V	K	E	A	F	E	R	A	K	S	E	A	K	E	V	Y	V	E	K	L	I	E	N	P	K	H	I	E	V	Q	I	L	G	D	Y	E	G	N	I	V	H	L	Y	E	R	D	C	S	V	Q	R	R	H	Q	K	V	V	E	V
Template Known Secondary structure						T	T	T		S	S	T	T						S																										S												T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																													.																												.	.
Query SS confidence																													.																												.	.
Query Sequence		R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W
Query Conservation																													.																												.	.
Alig confidence																													.																												.	.
Template Conservation
Template Sequence		A	P	S	V	S	L	S	D	E	L	R	Q	R	I	C	E	A	A	V	Q	L	M	R	S	V	G	Y	V	N	A	G	T	V	E	F	L	V	S	G	D	E	F	Y	F	I	E	V	N	P	R	I	Q	V	E	H	T	I	T	E	M	I	T	G	I	D	I	V	Q	S	Q	I	L	I
Template Known Secondary structure			S		T	T																					T													T	T										S			T	T									T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions