Job Description P0C0U4 Confidence 99.97% Date Thu Jan 5 11:30:01 GMT 2012 Rank 36 Aligned Residues 268 % Identity 19% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.
Query Sequence		K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	.	.	.	.	.	.	.	.	.	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y
Query Conservation																																																										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																																														.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation										.	.	.																																																																			.	.	.
Template Sequence		K	I	L	L	L	G	S	G	.	.	.	E	L	G	K	E	I	A	I	E	A	Q	R	L	G	V	E	V	V	A	V	D	R	Y	A	N	A	P	A	M	Q	V	A	H	R	S	Y	V	G	N	M	M	D	K	D	F	L	W	S	V	V	E	R	E	K	P	D	A	I	I	P	E	I	E	A	I	N	.	.	.
Template Known Secondary structure							S		S	.	.	.													T	T								S	S	T	T							S	S					S		T	T															S						S	S		S		.	.	.
Template Predicted Secondary structure										.	.	.																																																																			.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	.	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V
Query Conservation																																			.
Alig confidence		.																																	.																													.									.	.	.	.
Template Conservation		.																																																														.									.	.	.	.
Template Sequence		.	L	D	A	L	F	E	F	E	K	D	G	Y	F	V	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	Y	A	T	T	L	D	E	L	Y	E	A	C	E	K	I	.	G	Y	P	C	H	T	K	A	.	.	.	.	I	M	S	G	S
Template Known Secondary structure		.										T	T			B	S	S									T	S											T	T											S	S												.		S	S						.	.	.	.	S
Template Predicted Secondary structure		.																																																														.									.	.	.	.
Template SS confidence
			95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.					.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	.	.	.	.	.	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T
Query Conservation																																																.	.	.	.	.
Alig confidence																	.	.	.	.	.																											.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		Y	F	V	K	G	P	E	D	I	P	K	A	W	E	E	.	.	.	.	.	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E	N	G	E	I	V	T	T	F	P	K	P	V	G	H	Y	Q	I	D	G	D	Y	H	A	S	W	Q	P	A	E	I	S	E	K	A	E
Template Known Secondary structure						S	G	G	G						T		.	.	.	.	.												S													T	T	S																T	T								S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																		.																																.	.	.	.
Query SS confidence																		.																																.	.	.	.
Query Sequence		P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	I	E	K	T	.	.	.	.	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation																		.																																.	.	.	.
Alig confidence																		.																																.	.	.	.
Template Conservation
Template Sequence		R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	G	L	G	I	F	G	V	E	M	F	V	K	G	D	K	V	W	A	N	E	V	S	P	R	P	H	D	T	G	M	V	T	L	A	S	H	P	P	G	F	S	E	F	A	L	H	L	R	A	V
Template Known Secondary structure																	S	S											T	T									S	S			G	G	G	G	G					S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions