Job Description P0C0U4 Confidence 99.98% Date Thu Jan 5 11:30:01 GMT 2012 Rank 27 Aligned Residues 280 % Identity 17% Template c1w96B_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a Resolution 1.8 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.												30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.				.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.				.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	.	.	.	.	.	.	.	.	.	.	.	E	I	L	.	.	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.				.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																					.	.	.	.	.	.	.	.	.	.	.				.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		K	I	L	I	A	.	.	.	N	N	G	I	A	A	V	K	E	I	R	S	V	R	K	W	A	Y	E	T	F	G	D	D	R	T	V	Q	F	V	A	M	A	T	P	E	D	L	E	A	N	A	E	Y	I	R	M	A	D	Q	Y	I	E	V	P	G	G	T	N	N	N	N	Y	A	N	V	D	L	I	V	D	I
Template Known Secondary structure							.	.	.																						S		T	T	S	S													T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		61	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
							58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	R	A	D	V	D	A	V	W	A	G	W	G	H	A	S	E	N	P	L	L	P	E	K	L	S	Q	S	K	R	K	V	I	F	I	G	P	P	G	N	A	M	R	S	L	G	D	K	I	S	S	T	I	V	A	Q	S	A	K	V	P	C	I	P	W	S	G	T	G	V	D	T	V	H	V	D	E	K	T
Template Known Secondary structure					T	T		S						S	S	T	T	T	T		T									S	T	T					S	S									S		S											T	T			B			B	T	T	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
															119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S	V	I	D	A	F	R	G	L	.	.	N	A	H	I	L	V	Q	E	Y	I	K	E	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																.																																					.	.
Template Conservation																														.
Template Sequence		G	L	V	S	V	D	D	D	I	Y	Q	K	G	C	C	T	S	P	E	D	G	L	Q	K	A	K	R	I	.	G	F	P	V	M	I	K	A	S	E	G	G	G	G	K	G	I	R	Q	V	E	R	E	E	D	F	I	A	L	Y	H	Q	A	A	N	E	I	P	G	S	P	I	F	I	M	K	L	A	G	R	A
Template Known Secondary structure												G	G	G	S		S	S												.		S	S						T	T			S	S	T	T					S	S	G	G	G												S	T	T											S
Template Predicted Secondary structure																														.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.			.	.	.	.	.
Predicted Secondary structure																								.	.	.																																						.											.	.
Query SS confidence																								.	.	.																																						.											.	.
Query Sequence		Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	.	.	.	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	D	V	A	G	V	D	I	L	R	A	.	.	N	R	G	P	L
Query Conservation																								.	.	.																																						.											.	.
Alig confidence																								.	.	.																																						.											.	.
Template Conservation
Template Sequence		R	H	L	E	V	Q	L	L	A	D	Q	Y	G	T	N	I	S	L	F	G	R	D	C	S	V	Q	R	R	H	Q	K	I	I	E	E	A	P	V	T	I	A	K	A	E	T	F	H	E	M	E	K	A	A	V	R	L	G	K	L	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S	H	D	D	G	K	F	Y
Template Known Secondary structure												T	T	S															T	T								S			S	S																				T													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		V	M	E	V	N	A	S	P	G	L	E	G	.	.	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		F	L	E	L	N	P	R	L	Q	V	E	H	P	T	T	E	M	V	S	G	V	N	L	P	A	A	Q	L	Q	I
Template Known Secondary structure								S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions