Job Description P0C0U4 Confidence 99.97% Date Thu Jan 5 11:30:01 GMT 2012 Rank 32 Aligned Residues 270 % Identity 14% Template c1vkzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		M	K	I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	.	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q
Query Conservation																																																					.
Alig confidence														.	.	.																																					.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	V	H	I	L	G	S	G	G	R	E	.	.	.	H	A	I	G	W	A	F	A	K	Q	G	Y	E	V	H	F	Y	P	G	N	A	G	T	K	R	D	G	T	N	H	P	Y	E	G	E	K	T	L	K	A	I	P	E	E	D	I	V	I	P	G	S	E	E	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S				.	.	.										T	T										T	T	G	G	G	T	S							T						T	S		S	S						S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		F	E	M	L	G	S	Y	P	L	.	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q
Query Conservation											.
Alig confidence											.																																														.
Template Conservation																																																									.
Template Sequence		F	L	V	E	R	S	N	V	F	G	P	V	K	E	V	A	R	L	E	G	S	K	V	Y	A	K	R	F	X	K	K	Y	G	I	R	T	A	R	F	E	V	A	E	T	P	E	E	L	R	E	K	I	K	K	F	.	S	P	P	Y	V	I	K	A	D	G	L	A	R	G	K	G	V	L	I	L	D	S	K	E
Template Known Secondary structure		G	T				T	T	B	S	S																						T	T										S	S									T	T	S	.		S	S						S	S			S	S							S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																																									.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.																																									.	.	.	.	.	.	.
Query Sequence		A	A	E	S	V	I	D	A	.	.	.	.	.	.	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	.	.	.	.	.	.	.	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I
Query Conservation										.	.	.	.	.	.																																									.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	I	E	K	G	S	K	L	I	I	G	E	L	I	K	G	V	K	G	P	V	V	I	D	E	F	L	A	G	N	E	L	S	A	X	A	V	V	N	G	R	N	F	V	I	L	P	F	V	R	D	Y	K	R	L	X	D	G	D	R	G	P	N	T	G	G	X	G	S	W	G	P	V	E	I	P	S	D	T
Template Known Secondary structure													T	S	S	S	T	T			S										S											T	T																T	T	T						S		S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																													.	.	.
Query SS confidence																			.	.	.	.	.	.																													.	.	.
Query Sequence		T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L	.	.	.	.	.	.	D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	I	.	.	.	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I
Query Conservation																			.	.	.	.	.	.																													.	.	.
Alig confidence																			.	.	.	.	.	.																													.	.	.
Template Conservation
Template Sequence		I	K	K	I	E	E	L	F	D	K	T	L	W	G	V	E	K	E	G	Y	A	Y	R	G	F	L	Y	L	G	L	X	L	H	D	G	D	P	Y	I	L	E	Y	N	V	R	L	G	D	P	E	T	E	V	I	V	T	L	N	P	E	G	F	V	N	A	V	L	E	G	Y
Template Known Secondary structure																			T	T															T	T									S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions