Job Description P0C0U4 Confidence 100.00% Date Thu Jan 5 11:30:01 GMT 2012 Rank 3 Aligned Residues 249 % Identity 28% Template c1uc8B_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:lysine biosynthesis enzyme; PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	L	S	R	D	G	T	L	Y	S	C	K	R	L	R	E	A	A	I	Q	R	G	H	L	V	E	I	L	D	P	L	S	C	Y	M	N	I	N	P	A	A	S	S	I	H	Y	K	G	R	K	L	P	H	F	D	A	V	I	P	R	I	G	T	A	I	T	F	Y	G	T	A	A	L	R	Q	F	E	M
Query Conservation
Alig confidence														.																													.	.	.	.	.	.	.																		.	.
Template Conservation														.																													.	.	.	.	.	.	.																		.	.
Template Sequence		L	A	I	L	Y	D	R	I	R	P	D	E	.	R	M	L	F	E	R	A	E	A	L	G	L	P	Y	K	K	V	Y	V	P	A	L	P	M	V	L	G	E	.	.	.	.	.	.	.	R	P	K	E	L	E	G	V	T	V	A	L	E	R	C	V	S	.	.	Q	S	R	G	L	A	A	A	R	Y	L	T	A
Template Known Secondary structure							S	S						.											T								G	G	G				B	T	T	B	.	.	.	.	.	.	.			G	G	G	T	T									S	S	.	.
Template Predicted Secondary structure														.																													.	.	.	.	.	.	.																		.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	Y	P	L	N	E	S	V	A	I	A	R	A	R	D	K	L	R	S	M	Q	L	L	A	R	Q	G	I	D	L	P	V	T	G	I	A	H	S	P	D	D	T	S	D	L	I	D	M	V	G	G	A	P	L	V	V	K	L	V	E	G	T	Q	G	I	G	V	V	L	A	E	T	R	Q	A	A	E	S
Query Conservation
Alig confidence																																																					.																										.	.	.
Template Conservation																																																					.																										.	.	.
Template Sequence		L	G	I	P	V	V	N	R	P	E	V	I	E	A	C	G	D	K	W	A	T	S	V	A	L	A	K	A	G	L	P	Q	P	K	T	A	L	A	T	D	R	E	E	A	L	R	L	M	E	A	F	.	G	Y	P	V	V	L	K	P	V	I	X	X	X	X	X	X	X	X	X	X	X	X	G	F	Q	.	.	.
Template Known Secondary structure		T	T					S																					T	T										S	S												.		S	S									B		S										T	T	.	.	.
Template Predicted Secondary structure																																																					.																										.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	A	F	R	G	L	N	A	H	I	L	V	Q	E	Y	I	K	E	A	Q	G	C	D	I	R	C	L	V	V	G	D	E	V	V	A	A	I	E	R	R	A	K	E	G	D	F	R	S	N	L	H	R	G	G	A	A	S	V	A	S	I	T	P	Q	E	R	E	I	A	I	K	A	A	R	T	M	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	H	Q	L	F	Y	I	Q	E	Y	V	E	K	P	G	R	D	.	I	R	V	F	V	V	G	E	R	A	I	A	A	I	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	N	C	P	L	T	E	E	V	A	R	L	S	V	K	A	A	E	A	V	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	T											S	S			.							T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	A	G	V	D	I	L	R	A	N	R	G	P	L	V	M	E	V	N	A	S	P	G	L	E	G	I	E	K	T	T	G	I	D	I	A	G	K	M	I	R	W	I	E	R	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	V	A	V	D	L	F	E	S	E	R	G	L	L	V	N	E	V	N	H	T	M	E	F	K	N	S	V	H	T	T	G	V	D	I	P	G	E	I	L	K	Y	A	W	S	L	A
Template Known Secondary structure		S										T	T									T	T				T	T																				T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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