Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0U4
Confidence100.00%DateThu Jan 5 11:30:01 GMT 2012
Rank3Aligned Residues249
% Identity28%Templatec1uc8B_
PDB info PDB header:biosynthetic proteinChain: B: PDB Molecule:lysine biosynthesis enzyme; PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  IAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEM
Query Conservation 
 

         
 
  
    
  
   
                         
                       
Alig confidence 











.



























.......
















..












Template Conservation              .
 
  

   

 
  

          .......        
        ..          

 
Template Sequence  LAILYDRIRPDE. RMLFERAEALGLPYKKVYVPALPMVLGE. . . . . . . RPKELEGVTVALERCVS. . QSRGLAAARYLTA
Template Known Secondary structure  SS

.T

GGG


BTTB.......

GGGTT



SS..
Template Predicted Secondary structure 



.








.......












..

Template SS confidence 















































































   2.......10... ......20.........30.........40. ........50........ .60.........70.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  LGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAES
Query Conservation   
         
    

      
   
   
                     
 



  
 

 

           
Alig confidence 


















































.
























...
Template Conservation   

       
     

      
   

  
                  .  
 



                 ...
Template Sequence  LGIPVVNRPEVIEACGDKWATSVALAKAGLPQPKTALATDREEALRLMEAF. GYPVVLKPVIXXXXXXXXXXXXGFQ. . .
Template Known Secondary structure  TT

S

TT




SS.
SS



B
S

TT...
Template Predicted Secondary structure 



















.
















...
Template SS confidence 















































































   72.......80.........90.........100.........110.........120.. .......130.........140.......
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  VIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTMAL
Query Conservation                   
                                                    
      


Alig confidence  ........















.















................






















Template Conservation  ........     


 
      .
   
  
        ................             
     



Template Sequence  . . . . . . . . HQLFYIQEYVEKPGRD. IRVFVVGERAIAAIYR. . . . . . . . . . . . . . . . AENCPLTEEVARLSVKAAEAVGG
Template Known Secondary structure  ........TT




SS

.TT
................




TT
Template Predicted Secondary structure  ........






.

................








Template SS confidence 















































































   163......170........ .180.........190.... .....200.........210.......
 
   243......250.........260.........270.........280.........290
Predicted Secondary structure 










Query SS confidence 















































Query Sequence  DVAGVDILRANRGPLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHA
Query Conservation      

 
       




 


        
  
   
   
    
Alig confidence 















































Template Conservation 
   

      
  
 


 


        
 

    
       
Template Sequence  GVVAVDLFESERGLLVNEVNHTMEFKNSVHTTGVDIPGEILKYAWSLA
Template Known Secondary structure  STTTT


TT


T
Template Predicted Secondary structure 










Template SS confidence 















































   232.......240.........250.........260.........270.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions