 |
Job Description | P0C0U4 | Confidence | 62.32% | Date | Thu Jan 5 11:30:01 GMT 2012 |
Rank | 286 | Aligned Residues | 82 |
% Identity | 10% | Template | c1a1sA_ |
PDB info |
PDB header:transcarbamylase | Chain: A: PDB Molecule:ornithine carbamoyltransferase; |
PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus
|
Resolution | 2.70 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | I | A | I | L | S | R | D | G | T | L | Y | S | C | K | R | L | R | E | A | A | I | Q | R | G | H | L | V | E | I | L | D | P | L | S | C | Y | M | N | I | N | P | A | A | S | S | I | H | Y | K | G | R | K | L | P | H | F | D | A | V | I | P | R | I | G | T | A | I | T | F | Y | G | T | A | A | L | R | Q | F |
Query Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|   |
| . | . |   |
|   |
|
|   |
|   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|
Template Sequence |   |
K | T | L | A | M | I | F | Q | K | P | S | T | R | T | R | V | S | F | E | V | A | M | A | H | L | G | G | H | A | L | Y | L | N | A | Q | D | L | Q | L | R | R | G | E | T | I | A | D | T | A | R | V | L | S | R | Y | . |
. |
V | D | A | I | M | A | R | V | Y | D | . |
. |
. |
. |
. |
H | K | D | V | E | D | L | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| T | T | T |
|
| S | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | . | . |
| S |  |  |  |  |  |
| S | S | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
. | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
. | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | L | G | S | Y | P | L | N |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
Template Sequence |   |
K | Y | A | T | V | P | V | I | N |
Template Known Secondary structure |   |
 |  |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
119 | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|