 |
Job Description | P0ADX9 | Confidence | 99.24% | Date | Thu Jan 5 11:22:04 GMT 2012 |
Rank | 222 | Aligned Residues | 97 |
% Identity | 18% | Template | d2b2ca1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Spermidine synthase
|
Resolution | 2.50 |
|
 |
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | C | L | D | C | F | A | G | S | G | A | L | G | L | E | A | L | S | R | . |
Y | A | A | G | A | T | L | I | E | M | D | R | A | V | S | Q | Q | L | I | K | N | L | A | T | L | K | A | . |
. |
. |
. |
G | N | A | R | V | V | N | S | N | A | M | S | F | L | A | Q | K | G | T | P | H | N | I | V | F | V | D | P |
Query Conservation |   |
  |   |
|
|
|
|   |   |
|
|
|   |   |   |
|
|
|   |
|
| . |
|
|   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
| . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|   |
Template Sequence |   |
K | R | V | L | I | I | G | G | G | D | G | G | I | L | R | E | V | L | K | H | E | S | V | E | K | V | T | M | C | E | I | D | E | M | V | I | D | V | A | K | K | F | L | P | G | M | S | C | G | F | S | H | P | K | L | D | L | F | C | G | D | G | F | E | F | L | K | N | H | K | N | E | F | D | V | I | I | T | D | S |
Template Known Secondary structure |   |
|  |  |  |  |  | S |
| T | T | S |  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | T | S | G | G | G | G |
| T | T |  |  |  |  |
| S |
|  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | R | R | G | L | L | E | E | T | I | N | L | L | E | D | N | G | W | L | A | D | E | A | L | I | Y | V | E | S | E | V |
Query Conservation |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |
|   |
|   |   |   |
Template Sequence |   |
S | Y | Y | E | L | L | R | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | K | E | D | G | I | L | S | S | Q | G | E | S |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
203 | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|