Job Description P0ADX9 Confidence 99.63% Date Thu Jan 5 11:22:04 GMT 2012 Rank 57 Aligned Residues 135 % Identity 13% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.
Predicted Secondary structure																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		G	Q	W	R	G	R	K	L	P	V	P	D	S	P	G	L	.	.	.	R	P	T	T	D	R	V	R	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	.	.	Y	A	A
Query Conservation																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																								.	.
Template Conservation																																																					.
Template Sequence		G	R	N	F	G	E	A	I	K	S	H	K	G	H	E	F	K	I	L	R	P	R	I	V	D	Y	L	D	K	M	K	R	G	P	Q	I	V	H	P	K	D	A	A	L	I	V	A	Y	A	G	I	.	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I	V	G	P	E	G
Template Known Secondary structure		T			T	T						T	T																		S				S															T	T		.		T	T									T	T	S												T	T	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	.	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V	D	P	P	F	R	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y
Query Conservation																										.
Alig confidence																										.														.	.																											.	.	.	.	.	.
Template Conservation																																								.	.																											.	.	.	.	.	.
Template Sequence		R	V	V	S	Y	E	I	R	E	D	F	A	K	L	A	W	E	N	I	K	W	A	G	F	D	D	R	V	T	I	K	L	K	D	I	Y	E	G	.	.	I	E	E	E	N	V	D	H	V	I	L	D	L	P	Q	P	E	R	V	V	E	H	A	A	K	A	.	.	.	.	.	.	L	K	P	G	G	F	F	V
Template Known Secondary structure								S																T		T	T	T						S		G	G	G		.	.					S								S	S		G	G	G	G								.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.																											.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.
		156	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	T	P	C
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions