Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADX9
Confidence99.83%DateThu Jan 5 11:22:04 GMT 2012
Rank10Aligned Residues163
% Identity16%Templatec3grzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein l11 methyltransferase; PDBTitle: crystal structure of ribosomal protein l11 methylase from2 lactobacillus delbrueckii subsp. bulgaricus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  WRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL
Query Conservation       
        

    
 
  
  
     
  



  


   


 



  
  

    
   
  
    
Alig confidence 




























...















































Template Conservation        
   


 
 

 
 
  
    ...     






 
 
 
     
   
  


   

  
  
    
Template Sequence  FKDQEIIRLDPGGNHQTTQLAMLGIERAM. . . VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALN
Template Known Secondary structure  STT
S




...SS

T
TTSTT
SS
T
Template Predicted Secondary structure 











...












Template SS confidence 















































































   141........150.........160......... 170.........180.........190.........200.........210.......
 
   99100.........110.........120.........130.........140.........150.........160......... 170...
Predicted Secondary structure 

































.....

Query SS confidence 






































































. . . . .



Query Sequence  KAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPA. . . . . NWSL
Query Conservation   
  
  
  
    
      

 
  



        
  
     
   
 



            .....    
Alig confidence 













...
















..








..























.....



Template Conservation                ...     

 

 
     ..         ..  




 

 


       
   
   

  
Template Sequence  GIYDIALQKTSLLA. . . DVDGKFDLIVANILAEI. . LLDLIPQLD. . SHLNEDGQVIFSGIDYLQLPKIEQALAENSFQI
Template Known Secondary structure  T



SSTTT...T

S
S
..GGGSG..GGGGGTT
Template Predicted Secondary structure 








...









..
..










Template SS confidence 















































































   223......230...... ...240.........250... ......260.. .......270.........280.........290.....
 
   174.....180.........190.
Predicted Secondary structure 




Query SS confidence 

















Query Sequence  HREKVAGQVAYRLYQREA
Query Conservation   
 
 

 
         
Alig confidence 

















Template Conservation          
  
   

 
Template Sequence  DLKMRAGRWIGLAISRKH
Template Known Secondary structure  TT

Template Predicted Secondary structure 



Template SS confidence 

















   296...300.........310...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions