 |
Job Description | P0ADX9 | Confidence | 99.69% | Date | Thu Jan 5 11:22:04 GMT 2012 |
Rank | 40 | Aligned Residues | 118 |
% Identity | 25% | Template | c3e05B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:precorrin-6y c5,15-methyltransferase (decarboxylating); |
PDBTitle: crystal structure of precorrin-6y c5,15-methyltransferase from2 geobacter metallireducens gs-15
|
Resolution | 1.80 Å |
|
 |
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | T | D | R | V | R | E | T | L | F | N | W | L | A | P | V | I | V | D | A | Q | C | L | D | C | F | A | G | S | G | A | L | G | L | E | A | L | S | R | Y | . |
A | A | G | A | T | L | I | E | M | D | R | A | V | S | Q | Q | L | I | K | N | L | A | T | L | K | A | G | N | A | R | V | V | N | S | N | A | M | S | F |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |   |
|
|
|   |
|
|
| . |
|   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |
|   |   |
|   |   | . |   |   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | K | Q | E | V | R | A | V | T | L | S | K | L | R | L | . |
Q | D | D | L | V | M | W | D | I | G | A | G | S | A | S | V | S | I | E | A | S | N | L | M | P | N | G | R | I | F | A | L | E | R | N | P | Q | Y | L | G | F | I | R | D | N | L | K | K | F | V | A | R | N | V | T | L | V | E | A | F | A | P | E | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| . |
| T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |
|
| T | T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | |
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | Q | K | G | T | P | H | N | I | V | F | V | D | P | P | F | R | R | G | L | L | E | E | T | I | N | L | L | E | D | N | G | W | L | A | D | E | A | L | I | Y | V | E | S |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . |   |   |
|   |
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |
|
|
|   |
|
|
|   |   |
Template Sequence |   |
L | D | D | L | P | . |
D | P | D | R | V | F | I | G | G | . |
. |
S | G | G | M | L | E | E | I | I | D | A | V | D | . |
. |
R | R | L | K | S | E | G | V | I | V | L | N | A |
Template Known Secondary structure |   |
| T | T | S |
| . |
|
| S |  |  |  |  | S |
| . | . |
| T | T |
|  |  |  |  |  |  |  |  |  | . | . |  |  |
|
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . |
|
|
|  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
311 | . | . | . | . | |
. | . | . | . | 320 | . | . | . | . | |
|
. | . | . | . | . | 330 | . | . | . | . | . | . | . | |
|
. | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|