Job Description P0ADX9 Confidence 99.78% Date Thu Jan 5 11:22:04 GMT 2012 Rank 22 Aligned Residues 145 % Identity 23% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		P	G	L	R	P	T	T	D	R	V	R	E	T	L	F	N	W	L	A	.	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	Y	A	A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G	N	A	R	V	V	N	S
Query Conservation																					.
Alig confidence																					.																												.																									.
Template Conservation																																																	.																									.
Template Sequence		G	K	V	D	P	A	S	L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	M	G	A	.	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	E	A	N	A	L	.	K	A	Q	A	L	H	S
Template Known Secondary structure		T	S																		T	T	T	T	T	T							T		T	T	S	T	T							T	T		.							S	B														T	T		.
Template Predicted Secondary structure																																																	.																									.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																																.	.	.	.
Query SS confidence																											.	.	.	.	.	.																																.	.	.	.
Query Sequence		N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V	D	P	P	F	R	R	G	.	.	.	.	.	.	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y	V	E	S	E	V	E	N	G	L	.	.	.	.	P	T	V	P	A	N	W	S	L	H	R	E	K	V
Query Conservation																											.	.	.	.	.	.																																.	.	.	.
Alig confidence						.																					.	.	.	.	.	.											.	.																				.	.	.	.
Template Conservation						.																																					.	.
Template Sequence		D	V	D	E	.	A	L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	.	.	A	R	L	R	P	G	G	V	F	F	L	V	S	N	P	F	L	K	Y	E	P	L	L	E	E	K	F	G	A	F	Q	T	L	K	V	A	E
Template Known Secondary structure		S	T	T	T	.	T	S		T	T														T	T		S	S														.	.															T	T	S											S								S	S
Template Predicted Secondary structure						.																																					.	.
Template SS confidence
		288	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		179
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		365

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions